Protein–RNA interactions for Protein: S4R3C0

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S4R3C0 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
S4R3C0 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
S4R3C0 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC15.93■□□□□ 0.14
S4R3C0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
S4R3C0 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
S4R3C0 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
S4R3C0 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
S4R3C0 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
S4R3C0 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.93■□□□□ 0.14
S4R3C0 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC15.93■□□□□ 0.14
S4R3C0 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
S4R3C0 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
S4R3C0 SMG8-203ENST00000578922 2178 ntBASIC15.92■□□□□ 0.14
S4R3C0 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
S4R3C0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
S4R3C0 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
S4R3C0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
S4R3C0 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
S4R3C0 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC15.92■□□□□ 0.14
S4R3C0 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
S4R3C0 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
S4R3C0 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
S4R3C0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
S4R3C0 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC15.92■□□□□ 0.14
S4R3C0 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
S4R3C0 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC15.92■□□□□ 0.14
S4R3C0 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
S4R3C0 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
S4R3C0 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
S4R3C0 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC15.92■□□□□ 0.14
S4R3C0 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC15.91■□□□□ 0.14
S4R3C0 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC15.91■□□□□ 0.14
S4R3C0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
S4R3C0 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
S4R3C0 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC15.91■□□□□ 0.14
S4R3C0 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
S4R3C0 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
S4R3C0 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
S4R3C0 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
S4R3C0 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
S4R3C0 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC15.91■□□□□ 0.14
S4R3C0 CNN2P6-201ENST00000439038 900 ntBASIC15.91■□□□□ 0.14
S4R3C0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC15.91■□□□□ 0.14
S4R3C0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC15.91■□□□□ 0.14
S4R3C0 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC15.91■□□□□ 0.14
S4R3C0 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC15.91■□□□□ 0.14
S4R3C0 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC15.91■□□□□ 0.14
S4R3C0 MAZ-216ENST00000616501 991 ntTSL 5 BASIC15.91■□□□□ 0.14
S4R3C0 AC092437.1-201ENST00000624794 1048 ntBASIC15.91■□□□□ 0.14
S4R3C0 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC15.91■□□□□ 0.14
S4R3C0 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
S4R3C0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
S4R3C0 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
S4R3C0 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
S4R3C0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
S4R3C0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC15.91■□□□□ 0.14
S4R3C0 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
S4R3C0 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC15.91■□□□□ 0.14
S4R3C0 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
S4R3C0 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
S4R3C0 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
S4R3C0 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
S4R3C0 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
S4R3C0 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
S4R3C0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
S4R3C0 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC15.9■□□□□ 0.14
S4R3C0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
S4R3C0 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
S4R3C0 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
S4R3C0 GLI3-203ENST00000437480 451 ntTSL 2 BASIC15.9■□□□□ 0.14
S4R3C0 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
S4R3C0 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
S4R3C0 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC15.9■□□□□ 0.14
S4R3C0 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC15.9■□□□□ 0.14
S4R3C0 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC15.9■□□□□ 0.14
S4R3C0 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
S4R3C0 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
S4R3C0 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
S4R3C0 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC15.9■□□□□ 0.14
S4R3C0 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
S4R3C0 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC15.9■□□□□ 0.14
S4R3C0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
S4R3C0 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
S4R3C0 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
S4R3C0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
S4R3C0 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
S4R3C0 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
S4R3C0 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC15.89■□□□□ 0.13
S4R3C0 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
S4R3C0 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC15.89■□□□□ 0.13
S4R3C0 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
S4R3C0 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
S4R3C0 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
S4R3C0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC15.89■□□□□ 0.13
S4R3C0 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
S4R3C0 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC15.89■□□□□ 0.13
S4R3C0 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
S4R3C0 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
S4R3C0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
S4R3C0 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms