Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HRH3Q9Y5N1 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
HRH3Q9Y5N1 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HRH3Q9Y5N1 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
HRH3Q9Y5N1 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HRH3Q9Y5N1 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HRH3Q9Y5N1 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
HRH3Q9Y5N1 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HRH3Q9Y5N1 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
HRH3Q9Y5N1 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
HRH3Q9Y5N1 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HRH3Q9Y5N1 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HRH3Q9Y5N1 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HRH3Q9Y5N1 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
HRH3Q9Y5N1 AC098590.1-201ENST00000468126 897 ntBASIC18.63■□□□□ 0.57
HRH3Q9Y5N1 RPS2P52-201ENST00000469610 820 ntBASIC18.63■□□□□ 0.57
HRH3Q9Y5N1 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.63■□□□□ 0.57
HRH3Q9Y5N1 AC093827.2-201ENST00000512654 315 ntBASIC18.63■□□□□ 0.57
HRH3Q9Y5N1 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.63■□□□□ 0.57
HRH3Q9Y5N1 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.63■□□□□ 0.57
HRH3Q9Y5N1 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HRH3Q9Y5N1 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HRH3Q9Y5N1 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HRH3Q9Y5N1 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HRH3Q9Y5N1 AC087633.2-202ENST00000565166 1439 ntBASIC18.63■□□□□ 0.57
HRH3Q9Y5N1 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HRH3Q9Y5N1 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HRH3Q9Y5N1 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HRH3Q9Y5N1 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HRH3Q9Y5N1 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
HRH3Q9Y5N1 AC006128.1-201ENST00000624704 1661 ntBASIC18.63■□□□□ 0.57
HRH3Q9Y5N1 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HRH3Q9Y5N1 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HRH3Q9Y5N1 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.63■□□□□ 0.57
HRH3Q9Y5N1 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HRH3Q9Y5N1 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
HRH3Q9Y5N1 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
HRH3Q9Y5N1 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HRH3Q9Y5N1 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HRH3Q9Y5N1 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HRH3Q9Y5N1 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
HRH3Q9Y5N1 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HRH3Q9Y5N1 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
HRH3Q9Y5N1 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.62■□□□□ 0.57
HRH3Q9Y5N1 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HRH3Q9Y5N1 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
HRH3Q9Y5N1 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
HRH3Q9Y5N1 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.62■□□□□ 0.57
HRH3Q9Y5N1 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HRH3Q9Y5N1 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HRH3Q9Y5N1 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HRH3Q9Y5N1 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.62■□□□□ 0.57
HRH3Q9Y5N1 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HRH3Q9Y5N1 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HRH3Q9Y5N1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
HRH3Q9Y5N1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HRH3Q9Y5N1 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HRH3Q9Y5N1 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HRH3Q9Y5N1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
HRH3Q9Y5N1 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HRH3Q9Y5N1 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HRH3Q9Y5N1 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.61■□□□□ 0.57
HRH3Q9Y5N1 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
HRH3Q9Y5N1 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HRH3Q9Y5N1 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HRH3Q9Y5N1 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HRH3Q9Y5N1 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.61■□□□□ 0.57
HRH3Q9Y5N1 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HRH3Q9Y5N1 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HRH3Q9Y5N1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
HRH3Q9Y5N1 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HRH3Q9Y5N1 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HRH3Q9Y5N1 KRT18P68-201ENST00000392293 1000 ntBASIC18.61■□□□□ 0.57
HRH3Q9Y5N1 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
HRH3Q9Y5N1 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.61■□□□□ 0.57
HRH3Q9Y5N1 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.61■□□□□ 0.57
HRH3Q9Y5N1 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.61■□□□□ 0.57
HRH3Q9Y5N1 AC105020.6-201ENST00000621523 1217 ntBASIC18.61■□□□□ 0.57
HRH3Q9Y5N1 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
HRH3Q9Y5N1 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HRH3Q9Y5N1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HRH3Q9Y5N1 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
HRH3Q9Y5N1 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.61■□□□□ 0.57
HRH3Q9Y5N1 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.61■□□□□ 0.57
HRH3Q9Y5N1 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HRH3Q9Y5N1 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HRH3Q9Y5N1 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HRH3Q9Y5N1 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
HRH3Q9Y5N1 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.6■□□□□ 0.57
HRH3Q9Y5N1 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HRH3Q9Y5N1 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HRH3Q9Y5N1 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.6■□□□□ 0.57
HRH3Q9Y5N1 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.6■□□□□ 0.57
HRH3Q9Y5N1 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.6■□□□□ 0.57
HRH3Q9Y5N1 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HRH3Q9Y5N1 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HRH3Q9Y5N1 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
HRH3Q9Y5N1 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HRH3Q9Y5N1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.6■□□□□ 0.57
HRH3Q9Y5N1 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms