Protein–RNA interactions for Protein: Q9Y2Y8

PRG3, Proteoglycan 3, humanhuman

Predicted RBP Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRG3Q9Y2Y8 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PRG3Q9Y2Y8 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PRG3Q9Y2Y8 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PRG3Q9Y2Y8 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PRG3Q9Y2Y8 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.68■■□□□ 1.06
PRG3Q9Y2Y8 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRG3Q9Y2Y8 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PRG3Q9Y2Y8 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.68■■□□□ 1.06
PRG3Q9Y2Y8 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
PRG3Q9Y2Y8 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PRG3Q9Y2Y8 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRG3Q9Y2Y8 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PRG3Q9Y2Y8 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRG3Q9Y2Y8 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.68■■□□□ 1.06
PRG3Q9Y2Y8 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRG3Q9Y2Y8 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
PRG3Q9Y2Y8 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PRG3Q9Y2Y8 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRG3Q9Y2Y8 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
PRG3Q9Y2Y8 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.67■■□□□ 1.06
PRG3Q9Y2Y8 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRG3Q9Y2Y8 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRG3Q9Y2Y8 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PRG3Q9Y2Y8 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PRG3Q9Y2Y8 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PRG3Q9Y2Y8 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.67■■□□□ 1.06
PRG3Q9Y2Y8 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.67■■□□□ 1.06
PRG3Q9Y2Y8 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRG3Q9Y2Y8 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.67■■□□□ 1.06
PRG3Q9Y2Y8 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.67■■□□□ 1.06
PRG3Q9Y2Y8 AC110285.5-201ENST00000611501 352 ntBASIC21.67■■□□□ 1.06
PRG3Q9Y2Y8 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRG3Q9Y2Y8 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRG3Q9Y2Y8 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRG3Q9Y2Y8 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRG3Q9Y2Y8 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.66■■□□□ 1.06
PRG3Q9Y2Y8 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRG3Q9Y2Y8 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRG3Q9Y2Y8 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
PRG3Q9Y2Y8 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.66■■□□□ 1.06
PRG3Q9Y2Y8 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRG3Q9Y2Y8 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PRG3Q9Y2Y8 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PRG3Q9Y2Y8 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PRG3Q9Y2Y8 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRG3Q9Y2Y8 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.66■■□□□ 1.06
PRG3Q9Y2Y8 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.66■■□□□ 1.06
PRG3Q9Y2Y8 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.66■■□□□ 1.06
PRG3Q9Y2Y8 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.66■■□□□ 1.06
PRG3Q9Y2Y8 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.66■■□□□ 1.06
PRG3Q9Y2Y8 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.66■■□□□ 1.06
PRG3Q9Y2Y8 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.66■■□□□ 1.06
PRG3Q9Y2Y8 AC124283.5-201ENST00000624661 1809 ntBASIC21.66■■□□□ 1.06
PRG3Q9Y2Y8 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PRG3Q9Y2Y8 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PRG3Q9Y2Y8 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
PRG3Q9Y2Y8 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.65■■□□□ 1.06
PRG3Q9Y2Y8 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
PRG3Q9Y2Y8 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PRG3Q9Y2Y8 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRG3Q9Y2Y8 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.65■■□□□ 1.06
PRG3Q9Y2Y8 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRG3Q9Y2Y8 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PRG3Q9Y2Y8 RPS2P55-201ENST00000397318 883 ntBASIC21.65■■□□□ 1.06
PRG3Q9Y2Y8 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PRG3Q9Y2Y8 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.65■■□□□ 1.06
PRG3Q9Y2Y8 AC107956.1-201ENST00000494359 873 ntBASIC21.65■■□□□ 1.06
PRG3Q9Y2Y8 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.65■■□□□ 1.06
PRG3Q9Y2Y8 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.65■■□□□ 1.06
PRG3Q9Y2Y8 AC233702.5-201ENST00000584107 538 ntBASIC21.65■■□□□ 1.06
PRG3Q9Y2Y8 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PRG3Q9Y2Y8 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRG3Q9Y2Y8 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.65■■□□□ 1.06
PRG3Q9Y2Y8 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRG3Q9Y2Y8 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PRG3Q9Y2Y8 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
PRG3Q9Y2Y8 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.64■■□□□ 1.06
PRG3Q9Y2Y8 AF106564.1-201ENST00000607058 2553 ntBASIC21.64■■□□□ 1.06
PRG3Q9Y2Y8 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
PRG3Q9Y2Y8 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
PRG3Q9Y2Y8 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.64■■□□□ 1.05
PRG3Q9Y2Y8 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PRG3Q9Y2Y8 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PRG3Q9Y2Y8 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PRG3Q9Y2Y8 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PRG3Q9Y2Y8 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.64■■□□□ 1.05
PRG3Q9Y2Y8 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PRG3Q9Y2Y8 AC012618.2-201ENST00000428058 849 ntBASIC21.64■■□□□ 1.05
PRG3Q9Y2Y8 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PRG3Q9Y2Y8 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PRG3Q9Y2Y8 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.64■■□□□ 1.05
PRG3Q9Y2Y8 FEM1AP4-201ENST00000443167 1987 ntBASIC21.64■■□□□ 1.05
PRG3Q9Y2Y8 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PRG3Q9Y2Y8 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PRG3Q9Y2Y8 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PRG3Q9Y2Y8 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PRG3Q9Y2Y8 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PRG3Q9Y2Y8 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PRG3Q9Y2Y8 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PRG3Q9Y2Y8 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms