Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RCL1Q9Y2P8 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RCL1Q9Y2P8 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RCL1Q9Y2P8 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RCL1Q9Y2P8 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RCL1Q9Y2P8 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RCL1Q9Y2P8 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.49■□□□□ 0.23
RCL1Q9Y2P8 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RCL1Q9Y2P8 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.49■□□□□ 0.23
RCL1Q9Y2P8 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.49■□□□□ 0.23
RCL1Q9Y2P8 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RCL1Q9Y2P8 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RCL1Q9Y2P8 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RCL1Q9Y2P8 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RCL1Q9Y2P8 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RCL1Q9Y2P8 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RCL1Q9Y2P8 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RCL1Q9Y2P8 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
RCL1Q9Y2P8 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC16.49■□□□□ 0.23
RCL1Q9Y2P8 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RCL1Q9Y2P8 AC011298.3-201ENST00000615796 283 ntBASIC16.49■□□□□ 0.23
RCL1Q9Y2P8 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC16.49■□□□□ 0.23
RCL1Q9Y2P8 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RCL1Q9Y2P8 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RCL1Q9Y2P8 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RCL1Q9Y2P8 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.49■□□□□ 0.23
RCL1Q9Y2P8 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RCL1Q9Y2P8 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RCL1Q9Y2P8 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RCL1Q9Y2P8 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RCL1Q9Y2P8 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RCL1Q9Y2P8 HCG11-201ENST00000411553 5696 ntBASIC16.49■□□□□ 0.23
RCL1Q9Y2P8 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
RCL1Q9Y2P8 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RCL1Q9Y2P8 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RCL1Q9Y2P8 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
RCL1Q9Y2P8 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RCL1Q9Y2P8 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC16.48■□□□□ 0.23
RCL1Q9Y2P8 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RCL1Q9Y2P8 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RCL1Q9Y2P8 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.48■□□□□ 0.23
RCL1Q9Y2P8 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.48■□□□□ 0.23
RCL1Q9Y2P8 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
RCL1Q9Y2P8 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RCL1Q9Y2P8 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RCL1Q9Y2P8 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RCL1Q9Y2P8 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
RCL1Q9Y2P8 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RCL1Q9Y2P8 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RCL1Q9Y2P8 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RCL1Q9Y2P8 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC16.48■□□□□ 0.23
RCL1Q9Y2P8 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC16.48■□□□□ 0.23
RCL1Q9Y2P8 AL512631.2-201ENST00000604634 923 ntBASIC16.48■□□□□ 0.23
RCL1Q9Y2P8 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.48■□□□□ 0.23
RCL1Q9Y2P8 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RCL1Q9Y2P8 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RCL1Q9Y2P8 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RCL1Q9Y2P8 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RCL1Q9Y2P8 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RCL1Q9Y2P8 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.48■□□□□ 0.23
RCL1Q9Y2P8 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.48■□□□□ 0.23
RCL1Q9Y2P8 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.48■□□□□ 0.23
RCL1Q9Y2P8 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
RCL1Q9Y2P8 AP004607.4-201ENST00000530158 1459 ntBASIC16.48■□□□□ 0.23
RCL1Q9Y2P8 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RCL1Q9Y2P8 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
RCL1Q9Y2P8 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RCL1Q9Y2P8 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RCL1Q9Y2P8 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.47■□□□□ 0.23
RCL1Q9Y2P8 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
RCL1Q9Y2P8 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.47■□□□□ 0.23
RCL1Q9Y2P8 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.47■□□□□ 0.23
RCL1Q9Y2P8 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RCL1Q9Y2P8 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.47■□□□□ 0.23
RCL1Q9Y2P8 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RCL1Q9Y2P8 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC16.47■□□□□ 0.23
RCL1Q9Y2P8 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RCL1Q9Y2P8 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.47■□□□□ 0.23
RCL1Q9Y2P8 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.47■□□□□ 0.23
RCL1Q9Y2P8 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
RCL1Q9Y2P8 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
RCL1Q9Y2P8 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
RCL1Q9Y2P8 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
RCL1Q9Y2P8 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RCL1Q9Y2P8 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC16.47■□□□□ 0.23
RCL1Q9Y2P8 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.47■□□□□ 0.23
RCL1Q9Y2P8 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RCL1Q9Y2P8 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RCL1Q9Y2P8 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.47■□□□□ 0.23
RCL1Q9Y2P8 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RCL1Q9Y2P8 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RCL1Q9Y2P8 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RCL1Q9Y2P8 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RCL1Q9Y2P8 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
RCL1Q9Y2P8 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
RCL1Q9Y2P8 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC16.46■□□□□ 0.23
RCL1Q9Y2P8 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.46■□□□□ 0.23
RCL1Q9Y2P8 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
RCL1Q9Y2P8 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.46■□□□□ 0.23
RCL1Q9Y2P8 TMEM179-206ENST00000616017 1645 ntBASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms