Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.1■□□□□ 0.81
VPS9D1Q9Y2B5 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.1■□□□□ 0.81
VPS9D1Q9Y2B5 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.1■□□□□ 0.81
VPS9D1Q9Y2B5 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.1■□□□□ 0.81
VPS9D1Q9Y2B5 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.1■□□□□ 0.81
VPS9D1Q9Y2B5 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
VPS9D1Q9Y2B5 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.1■□□□□ 0.81
VPS9D1Q9Y2B5 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
VPS9D1Q9Y2B5 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
VPS9D1Q9Y2B5 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VPS9D1Q9Y2B5 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.09■□□□□ 0.81
VPS9D1Q9Y2B5 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.09■□□□□ 0.81
VPS9D1Q9Y2B5 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
VPS9D1Q9Y2B5 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
VPS9D1Q9Y2B5 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.09■□□□□ 0.81
VPS9D1Q9Y2B5 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VPS9D1Q9Y2B5 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
VPS9D1Q9Y2B5 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
VPS9D1Q9Y2B5 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VPS9D1Q9Y2B5 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.09■□□□□ 0.81
VPS9D1Q9Y2B5 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
VPS9D1Q9Y2B5 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VPS9D1Q9Y2B5 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
VPS9D1Q9Y2B5 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VPS9D1Q9Y2B5 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.09■□□□□ 0.81
VPS9D1Q9Y2B5 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
VPS9D1Q9Y2B5 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VPS9D1Q9Y2B5 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.09■□□□□ 0.81
VPS9D1Q9Y2B5 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VPS9D1Q9Y2B5 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
VPS9D1Q9Y2B5 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
VPS9D1Q9Y2B5 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.08■□□□□ 0.81
VPS9D1Q9Y2B5 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VPS9D1Q9Y2B5 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VPS9D1Q9Y2B5 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
VPS9D1Q9Y2B5 DPP3P2-201ENST00000416030 1696 ntBASIC20.08■□□□□ 0.81
VPS9D1Q9Y2B5 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.08■□□□□ 0.81
VPS9D1Q9Y2B5 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VPS9D1Q9Y2B5 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VPS9D1Q9Y2B5 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.08■□□□□ 0.81
VPS9D1Q9Y2B5 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.08■□□□□ 0.81
VPS9D1Q9Y2B5 AL137784.2-201ENST00000607332 1000 ntBASIC20.08■□□□□ 0.81
VPS9D1Q9Y2B5 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
VPS9D1Q9Y2B5 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
VPS9D1Q9Y2B5 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
VPS9D1Q9Y2B5 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
VPS9D1Q9Y2B5 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.8
VPS9D1Q9Y2B5 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
VPS9D1Q9Y2B5 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
VPS9D1Q9Y2B5 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.07■□□□□ 0.8
VPS9D1Q9Y2B5 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
VPS9D1Q9Y2B5 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VPS9D1Q9Y2B5 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
VPS9D1Q9Y2B5 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
VPS9D1Q9Y2B5 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.07■□□□□ 0.8
VPS9D1Q9Y2B5 KRT18P68-201ENST00000392293 1000 ntBASIC20.07■□□□□ 0.8
VPS9D1Q9Y2B5 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.07■□□□□ 0.8
VPS9D1Q9Y2B5 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
VPS9D1Q9Y2B5 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
VPS9D1Q9Y2B5 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.07■□□□□ 0.8
VPS9D1Q9Y2B5 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
VPS9D1Q9Y2B5 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
VPS9D1Q9Y2B5 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.07■□□□□ 0.8
VPS9D1Q9Y2B5 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
VPS9D1Q9Y2B5 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.07■□□□□ 0.8
VPS9D1Q9Y2B5 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VPS9D1Q9Y2B5 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VPS9D1Q9Y2B5 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
VPS9D1Q9Y2B5 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
VPS9D1Q9Y2B5 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VPS9D1Q9Y2B5 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VPS9D1Q9Y2B5 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.07■□□□□ 0.8
VPS9D1Q9Y2B5 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VPS9D1Q9Y2B5 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
VPS9D1Q9Y2B5 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
VPS9D1Q9Y2B5 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VPS9D1Q9Y2B5 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.06■□□□□ 0.8
VPS9D1Q9Y2B5 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VPS9D1Q9Y2B5 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VPS9D1Q9Y2B5 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VPS9D1Q9Y2B5 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VPS9D1Q9Y2B5 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.06■□□□□ 0.8
VPS9D1Q9Y2B5 AL512625.2-201ENST00000417533 625 ntBASIC20.06■□□□□ 0.8
VPS9D1Q9Y2B5 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
VPS9D1Q9Y2B5 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.06■□□□□ 0.8
VPS9D1Q9Y2B5 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.06■□□□□ 0.8
VPS9D1Q9Y2B5 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
VPS9D1Q9Y2B5 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
VPS9D1Q9Y2B5 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VPS9D1Q9Y2B5 AC005181.1-201ENST00000604782 1256 ntBASIC20.06■□□□□ 0.8
VPS9D1Q9Y2B5 AC105020.6-201ENST00000621523 1217 ntBASIC20.06■□□□□ 0.8
VPS9D1Q9Y2B5 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.06■□□□□ 0.8
VPS9D1Q9Y2B5 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.06■□□□□ 0.8
VPS9D1Q9Y2B5 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VPS9D1Q9Y2B5 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
VPS9D1Q9Y2B5 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VPS9D1Q9Y2B5 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VPS9D1Q9Y2B5 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VPS9D1Q9Y2B5 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VPS9D1Q9Y2B5 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms