Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 C2orf69P3-201ENST00000565542 1120 ntBASIC30.91■■■□□ 2.54
COL17A1Q9UMD9 CLN6-214ENST00000636314 442 ntTSL 3 BASIC30.91■■■□□ 2.54
COL17A1Q9UMD9 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC30.91■■■□□ 2.54
COL17A1Q9UMD9 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
COL17A1Q9UMD9 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
COL17A1Q9UMD9 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC30.91■■■□□ 2.54
COL17A1Q9UMD9 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC30.9■■■□□ 2.54
COL17A1Q9UMD9 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC30.9■■■□□ 2.54
COL17A1Q9UMD9 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC30.9■■■□□ 2.54
COL17A1Q9UMD9 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
COL17A1Q9UMD9 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC30.9■■■□□ 2.54
COL17A1Q9UMD9 AC139887.4-201ENST00000607877 719 ntBASIC30.9■■■□□ 2.54
COL17A1Q9UMD9 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC30.9■■■□□ 2.54
COL17A1Q9UMD9 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
COL17A1Q9UMD9 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
COL17A1Q9UMD9 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
COL17A1Q9UMD9 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC30.9■■■□□ 2.54
COL17A1Q9UMD9 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC30.9■■■□□ 2.54
COL17A1Q9UMD9 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC30.9■■■□□ 2.54
COL17A1Q9UMD9 STX5-203ENST00000394690 1568 ntTSL 5 BASIC30.89■■■□□ 2.54
COL17A1Q9UMD9 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC30.89■■■□□ 2.54
COL17A1Q9UMD9 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC30.89■■■□□ 2.54
COL17A1Q9UMD9 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC30.89■■■□□ 2.54
COL17A1Q9UMD9 AL138966.2-201ENST00000621997 464 ntBASIC30.89■■■□□ 2.54
COL17A1Q9UMD9 AC093458.2-201ENST00000623150 629 ntBASIC30.89■■■□□ 2.54
COL17A1Q9UMD9 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC30.89■■■□□ 2.54
COL17A1Q9UMD9 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC30.89■■■□□ 2.54
COL17A1Q9UMD9 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC30.89■■■□□ 2.54
COL17A1Q9UMD9 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
COL17A1Q9UMD9 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC30.89■■■□□ 2.54
COL17A1Q9UMD9 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.53
COL17A1Q9UMD9 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC30.89■■■□□ 2.53
COL17A1Q9UMD9 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
COL17A1Q9UMD9 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
COL17A1Q9UMD9 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC30.88■■■□□ 2.53
COL17A1Q9UMD9 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
COL17A1Q9UMD9 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC30.88■■■□□ 2.53
COL17A1Q9UMD9 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC30.88■■■□□ 2.53
COL17A1Q9UMD9 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC30.88■■■□□ 2.53
COL17A1Q9UMD9 HCG4P8-203ENST00000443049 980 ntBASIC30.88■■■□□ 2.53
COL17A1Q9UMD9 SLC25A1P4-201ENST00000567977 778 ntBASIC30.88■■■□□ 2.53
COL17A1Q9UMD9 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC30.88■■■□□ 2.53
COL17A1Q9UMD9 AC012313.10-201ENST00000623509 926 ntBASIC30.88■■■□□ 2.53
COL17A1Q9UMD9 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC30.87■■■□□ 2.53
COL17A1Q9UMD9 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
COL17A1Q9UMD9 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
COL17A1Q9UMD9 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC30.87■■■□□ 2.53
COL17A1Q9UMD9 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC30.87■■■□□ 2.53
COL17A1Q9UMD9 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
COL17A1Q9UMD9 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
COL17A1Q9UMD9 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC30.87■■■□□ 2.53
COL17A1Q9UMD9 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
COL17A1Q9UMD9 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
COL17A1Q9UMD9 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
COL17A1Q9UMD9 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC30.87■■■□□ 2.53
COL17A1Q9UMD9 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC30.87■■■□□ 2.53
COL17A1Q9UMD9 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
COL17A1Q9UMD9 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC30.87■■■□□ 2.53
COL17A1Q9UMD9 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
COL17A1Q9UMD9 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC30.86■■■□□ 2.53
COL17A1Q9UMD9 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
COL17A1Q9UMD9 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC30.86■■■□□ 2.53
COL17A1Q9UMD9 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC30.86■■■□□ 2.53
COL17A1Q9UMD9 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC30.86■■■□□ 2.53
COL17A1Q9UMD9 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC30.86■■■□□ 2.53
COL17A1Q9UMD9 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC30.86■■■□□ 2.53
COL17A1Q9UMD9 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
COL17A1Q9UMD9 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
COL17A1Q9UMD9 AL121956.5-201ENST00000625261 221 ntBASIC30.86■■■□□ 2.53
COL17A1Q9UMD9 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
COL17A1Q9UMD9 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
COL17A1Q9UMD9 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
COL17A1Q9UMD9 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC30.85■■■□□ 2.53
COL17A1Q9UMD9 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
COL17A1Q9UMD9 RNF152P1-201ENST00000397754 604 ntBASIC30.85■■■□□ 2.53
COL17A1Q9UMD9 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC30.85■■■□□ 2.53
COL17A1Q9UMD9 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
COL17A1Q9UMD9 YBX1P2-201ENST00000489612 999 ntBASIC30.85■■■□□ 2.53
COL17A1Q9UMD9 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC30.85■■■□□ 2.53
COL17A1Q9UMD9 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC30.85■■■□□ 2.53
COL17A1Q9UMD9 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC30.85■■■□□ 2.53
COL17A1Q9UMD9 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
COL17A1Q9UMD9 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
COL17A1Q9UMD9 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC30.84■■■□□ 2.53
COL17A1Q9UMD9 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC30.84■■■□□ 2.53
COL17A1Q9UMD9 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC30.84■■■□□ 2.53
COL17A1Q9UMD9 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
COL17A1Q9UMD9 IER3-202ENST00000376377 1350 ntBASIC30.84■■■□□ 2.53
COL17A1Q9UMD9 CD320-202ENST00000537716 1119 ntTSL 2 BASIC30.84■■■□□ 2.53
COL17A1Q9UMD9 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC30.84■■■□□ 2.53
COL17A1Q9UMD9 AC004264.1-201ENST00000608354 794 ntBASIC30.84■■■□□ 2.53
COL17A1Q9UMD9 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC30.84■■■□□ 2.53
COL17A1Q9UMD9 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC30.84■■■□□ 2.53
COL17A1Q9UMD9 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC30.84■■■□□ 2.53
COL17A1Q9UMD9 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
COL17A1Q9UMD9 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
COL17A1Q9UMD9 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
COL17A1Q9UMD9 PNN-205ENST00000556530 601 ntTSL 2 BASIC30.83■■■□□ 2.53
COL17A1Q9UMD9 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC30.83■■■□□ 2.53
COL17A1Q9UMD9 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC30.83■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms