Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC32.61■■■□□ 2.81
RIMBP3Q9UFD9 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC32.61■■■□□ 2.81
RIMBP3Q9UFD9 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
RIMBP3Q9UFD9 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC32.61■■■□□ 2.81
RIMBP3Q9UFD9 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC32.61■■■□□ 2.81
RIMBP3Q9UFD9 AC141257.4-201ENST00000634557 245 ntBASIC32.61■■■□□ 2.81
RIMBP3Q9UFD9 AC136944.6-201ENST00000634818 245 ntBASIC32.61■■■□□ 2.81
RIMBP3Q9UFD9 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
RIMBP3Q9UFD9 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC32.6■■■□□ 2.81
RIMBP3Q9UFD9 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
RIMBP3Q9UFD9 FAAHP1-202ENST00000446499 1238 ntBASIC32.6■■■□□ 2.81
RIMBP3Q9UFD9 HOMER2P1-201ENST00000455653 964 ntBASIC32.6■■■□□ 2.81
RIMBP3Q9UFD9 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC32.6■■■□□ 2.81
RIMBP3Q9UFD9 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC32.6■■■□□ 2.81
RIMBP3Q9UFD9 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC32.6■■■□□ 2.81
RIMBP3Q9UFD9 PRELID1P1-202ENST00000567272 903 ntBASIC32.6■■■□□ 2.81
RIMBP3Q9UFD9 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC32.6■■■□□ 2.81
RIMBP3Q9UFD9 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC32.6■■■□□ 2.81
RIMBP3Q9UFD9 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
RIMBP3Q9UFD9 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC32.59■■■□□ 2.81
RIMBP3Q9UFD9 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
RIMBP3Q9UFD9 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
RIMBP3Q9UFD9 SKP2-204ENST00000508514 821 ntTSL 3 BASIC32.59■■■□□ 2.81
RIMBP3Q9UFD9 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
RIMBP3Q9UFD9 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC32.59■■■□□ 2.81
RIMBP3Q9UFD9 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC32.59■■■□□ 2.81
RIMBP3Q9UFD9 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC32.59■■■□□ 2.81
RIMBP3Q9UFD9 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC32.59■■■□□ 2.81
RIMBP3Q9UFD9 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC32.59■■■□□ 2.81
RIMBP3Q9UFD9 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC32.59■■■□□ 2.81
RIMBP3Q9UFD9 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC32.59■■■□□ 2.81
RIMBP3Q9UFD9 KRT18P38-201ENST00000449496 1282 ntBASIC32.59■■■□□ 2.81
RIMBP3Q9UFD9 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC32.59■■■□□ 2.81
RIMBP3Q9UFD9 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC32.59■■■□□ 2.81
RIMBP3Q9UFD9 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
RIMBP3Q9UFD9 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC32.59■■■□□ 2.81
RIMBP3Q9UFD9 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC32.59■■■□□ 2.81
RIMBP3Q9UFD9 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC32.59■■■□□ 2.81
RIMBP3Q9UFD9 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC32.58■■■□□ 2.81
RIMBP3Q9UFD9 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
RIMBP3Q9UFD9 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
RIMBP3Q9UFD9 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC32.58■■■□□ 2.81
RIMBP3Q9UFD9 AC097488.1-201ENST00000507834 756 ntBASIC32.58■■■□□ 2.81
RIMBP3Q9UFD9 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC32.58■■■□□ 2.81
RIMBP3Q9UFD9 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC32.58■■■□□ 2.81
RIMBP3Q9UFD9 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC32.58■■■□□ 2.81
RIMBP3Q9UFD9 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
RIMBP3Q9UFD9 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC32.58■■■□□ 2.81
RIMBP3Q9UFD9 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC32.57■■■□□ 2.8
RIMBP3Q9UFD9 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
RIMBP3Q9UFD9 HIST1H2APS4-201ENST00000362070 348 ntBASIC32.57■■■□□ 2.8
RIMBP3Q9UFD9 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
RIMBP3Q9UFD9 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC32.57■■■□□ 2.8
RIMBP3Q9UFD9 FXN-203ENST00000396366 922 ntTSL 2 BASIC32.57■■■□□ 2.8
RIMBP3Q9UFD9 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC32.57■■■□□ 2.8
RIMBP3Q9UFD9 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
RIMBP3Q9UFD9 AC137767.1-201ENST00000602918 1920 ntBASIC32.57■■■□□ 2.8
RIMBP3Q9UFD9 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC32.57■■■□□ 2.8
RIMBP3Q9UFD9 AC004812.2-201ENST00000611079 2094 ntBASIC32.56■■■□□ 2.8
RIMBP3Q9UFD9 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC32.56■■■□□ 2.8
RIMBP3Q9UFD9 FDX2-206ENST00000492239 773 ntTSL 2 BASIC32.56■■■□□ 2.8
RIMBP3Q9UFD9 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC32.56■■■□□ 2.8
RIMBP3Q9UFD9 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
RIMBP3Q9UFD9 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC32.56■■■□□ 2.8
RIMBP3Q9UFD9 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC32.56■■■□□ 2.8
RIMBP3Q9UFD9 PPP1R14BP5-201ENST00000440334 435 ntBASIC32.55■■■□□ 2.8
RIMBP3Q9UFD9 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC32.55■■■□□ 2.8
RIMBP3Q9UFD9 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
RIMBP3Q9UFD9 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC32.55■■■□□ 2.8
RIMBP3Q9UFD9 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
RIMBP3Q9UFD9 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC32.55■■■□□ 2.8
RIMBP3Q9UFD9 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC32.55■■■□□ 2.8
RIMBP3Q9UFD9 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC32.54■■■□□ 2.8
RIMBP3Q9UFD9 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC32.54■■■□□ 2.8
RIMBP3Q9UFD9 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC32.54■■■□□ 2.8
RIMBP3Q9UFD9 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC32.54■■■□□ 2.8
RIMBP3Q9UFD9 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC32.54■■■□□ 2.8
RIMBP3Q9UFD9 UNC93B7-201ENST00000509439 705 ntBASIC32.54■■■□□ 2.8
RIMBP3Q9UFD9 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC32.54■■■□□ 2.8
RIMBP3Q9UFD9 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
RIMBP3Q9UFD9 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
RIMBP3Q9UFD9 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
RIMBP3Q9UFD9 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
RIMBP3Q9UFD9 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC32.53■■■□□ 2.8
RIMBP3Q9UFD9 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC32.53■■■□□ 2.8
RIMBP3Q9UFD9 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
RIMBP3Q9UFD9 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC32.53■■■□□ 2.8
RIMBP3Q9UFD9 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC32.52■■■□□ 2.8
RIMBP3Q9UFD9 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC32.52■■■□□ 2.8
RIMBP3Q9UFD9 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC32.52■■■□□ 2.8
RIMBP3Q9UFD9 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
RIMBP3Q9UFD9 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC32.52■■■□□ 2.8
RIMBP3Q9UFD9 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC32.52■■■□□ 2.8
RIMBP3Q9UFD9 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
RIMBP3Q9UFD9 AL136038.3-201ENST00000561909 1096 ntBASIC32.52■■■□□ 2.8
RIMBP3Q9UFD9 AL031008.1-201ENST00000619963 541 ntBASIC32.52■■■□□ 2.8
RIMBP3Q9UFD9 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC32.52■■■□□ 2.8
RIMBP3Q9UFD9 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC32.52■■■□□ 2.8
RIMBP3Q9UFD9 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
RIMBP3Q9UFD9 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC32.52■■■□□ 2.8
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms