Protein–RNA interactions for Protein: Q9NRL3

STRN4, Striatin-4, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STRN4Q9NRL3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
STRN4Q9NRL3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC26.95■■□□□ 1.9
STRN4Q9NRL3 AC023632.3-201ENST00000521633 145 ntBASIC26.95■■□□□ 1.9
STRN4Q9NRL3 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC26.95■■□□□ 1.9
STRN4Q9NRL3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC26.95■■□□□ 1.9
STRN4Q9NRL3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC26.95■■□□□ 1.9
STRN4Q9NRL3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
STRN4Q9NRL3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
STRN4Q9NRL3 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
STRN4Q9NRL3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
STRN4Q9NRL3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC26.94■■□□□ 1.9
STRN4Q9NRL3 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
STRN4Q9NRL3 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
STRN4Q9NRL3 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
STRN4Q9NRL3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC26.94■■□□□ 1.9
STRN4Q9NRL3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC26.94■■□□□ 1.9
STRN4Q9NRL3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC26.94■■□□□ 1.9
STRN4Q9NRL3 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
STRN4Q9NRL3 AC010203.1-204ENST00000548782 407 ntBASIC26.94■■□□□ 1.9
STRN4Q9NRL3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC26.94■■□□□ 1.9
STRN4Q9NRL3 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC26.94■■□□□ 1.9
STRN4Q9NRL3 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
STRN4Q9NRL3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC26.93■■□□□ 1.9
STRN4Q9NRL3 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC26.93■■□□□ 1.9
STRN4Q9NRL3 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
STRN4Q9NRL3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC26.93■■□□□ 1.9
STRN4Q9NRL3 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
STRN4Q9NRL3 AC116562.2-201ENST00000507042 360 ntBASIC26.93■■□□□ 1.9
STRN4Q9NRL3 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC26.93■■□□□ 1.9
STRN4Q9NRL3 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC26.93■■□□□ 1.9
STRN4Q9NRL3 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
STRN4Q9NRL3 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC26.93■■□□□ 1.9
STRN4Q9NRL3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
STRN4Q9NRL3 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
STRN4Q9NRL3 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
STRN4Q9NRL3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
STRN4Q9NRL3 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
STRN4Q9NRL3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC26.92■■□□□ 1.9
STRN4Q9NRL3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC26.92■■□□□ 1.9
STRN4Q9NRL3 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
STRN4Q9NRL3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
STRN4Q9NRL3 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
STRN4Q9NRL3 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
STRN4Q9NRL3 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC26.92■■□□□ 1.9
STRN4Q9NRL3 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC26.92■■□□□ 1.9
STRN4Q9NRL3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC26.92■■□□□ 1.9
STRN4Q9NRL3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
STRN4Q9NRL3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC26.92■■□□□ 1.9
STRN4Q9NRL3 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC26.92■■□□□ 1.9
STRN4Q9NRL3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
STRN4Q9NRL3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
STRN4Q9NRL3 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
STRN4Q9NRL3 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
STRN4Q9NRL3 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC26.91■■□□□ 1.9
STRN4Q9NRL3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
STRN4Q9NRL3 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
STRN4Q9NRL3 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
STRN4Q9NRL3 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
STRN4Q9NRL3 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC26.91■■□□□ 1.9
STRN4Q9NRL3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC26.91■■□□□ 1.9
STRN4Q9NRL3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC26.91■■□□□ 1.9
STRN4Q9NRL3 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
STRN4Q9NRL3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC26.91■■□□□ 1.9
STRN4Q9NRL3 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC26.91■■□□□ 1.9
STRN4Q9NRL3 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
STRN4Q9NRL3 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC26.91■■□□□ 1.9
STRN4Q9NRL3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC26.9■■□□□ 1.9
STRN4Q9NRL3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
STRN4Q9NRL3 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
STRN4Q9NRL3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
STRN4Q9NRL3 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
STRN4Q9NRL3 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
STRN4Q9NRL3 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
STRN4Q9NRL3 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC26.9■■□□□ 1.9
STRN4Q9NRL3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC26.9■■□□□ 1.9
STRN4Q9NRL3 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
STRN4Q9NRL3 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
STRN4Q9NRL3 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
STRN4Q9NRL3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
STRN4Q9NRL3 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
STRN4Q9NRL3 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
STRN4Q9NRL3 PALM-207ENST00000590161 2137 ntTSL 4 BASIC26.89■■□□□ 1.9
STRN4Q9NRL3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.9
STRN4Q9NRL3 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
STRN4Q9NRL3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC26.89■■□□□ 1.9
STRN4Q9NRL3 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC26.89■■□□□ 1.9
STRN4Q9NRL3 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC26.89■■□□□ 1.9
STRN4Q9NRL3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC26.89■■□□□ 1.9
STRN4Q9NRL3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC26.89■■□□□ 1.9
STRN4Q9NRL3 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC26.89■■□□□ 1.9
STRN4Q9NRL3 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
STRN4Q9NRL3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
STRN4Q9NRL3 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC26.89■■□□□ 1.9
STRN4Q9NRL3 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC26.89■■□□□ 1.9
STRN4Q9NRL3 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
STRN4Q9NRL3 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC26.89■■□□□ 1.89
STRN4Q9NRL3 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC26.88■■□□□ 1.89
STRN4Q9NRL3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC26.88■■□□□ 1.89
STRN4Q9NRL3 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
STRN4Q9NRL3 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms