Protein–RNA interactions for Protein: Q9NQ69

LHX9, LIM/homeobox protein Lhx9, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX9Q9NQ69 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.45■□□□□ 0.7
LHX9Q9NQ69 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
LHX9Q9NQ69 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LHX9Q9NQ69 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LHX9Q9NQ69 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
LHX9Q9NQ69 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
LHX9Q9NQ69 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LHX9Q9NQ69 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LHX9Q9NQ69 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
LHX9Q9NQ69 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.44■□□□□ 0.7
LHX9Q9NQ69 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LHX9Q9NQ69 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LHX9Q9NQ69 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LHX9Q9NQ69 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LHX9Q9NQ69 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
LHX9Q9NQ69 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LHX9Q9NQ69 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.44■□□□□ 0.7
LHX9Q9NQ69 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
LHX9Q9NQ69 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
LHX9Q9NQ69 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LHX9Q9NQ69 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.44■□□□□ 0.7
LHX9Q9NQ69 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.44■□□□□ 0.7
LHX9Q9NQ69 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
LHX9Q9NQ69 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LHX9Q9NQ69 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.43■□□□□ 0.7
LHX9Q9NQ69 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
LHX9Q9NQ69 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
LHX9Q9NQ69 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.43■□□□□ 0.7
LHX9Q9NQ69 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
LHX9Q9NQ69 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LHX9Q9NQ69 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.43■□□□□ 0.7
LHX9Q9NQ69 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LHX9Q9NQ69 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LHX9Q9NQ69 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.43■□□□□ 0.7
LHX9Q9NQ69 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LHX9Q9NQ69 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LHX9Q9NQ69 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.43■□□□□ 0.7
LHX9Q9NQ69 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.43■□□□□ 0.7
LHX9Q9NQ69 PNMA6B-201ENST00000538162 1200 ntBASIC19.43■□□□□ 0.7
LHX9Q9NQ69 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.43■□□□□ 0.7
LHX9Q9NQ69 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
LHX9Q9NQ69 AC008403.3-201ENST00000598924 454 ntBASIC19.43■□□□□ 0.7
LHX9Q9NQ69 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.43■□□□□ 0.7
LHX9Q9NQ69 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
LHX9Q9NQ69 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.43■□□□□ 0.7
LHX9Q9NQ69 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.43■□□□□ 0.7
LHX9Q9NQ69 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LHX9Q9NQ69 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LHX9Q9NQ69 GABARAPL3-202ENST00000624044 1851 ntBASIC19.43■□□□□ 0.7
LHX9Q9NQ69 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
LHX9Q9NQ69 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LHX9Q9NQ69 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LHX9Q9NQ69 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LHX9Q9NQ69 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LHX9Q9NQ69 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
LHX9Q9NQ69 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LHX9Q9NQ69 AC092368.3-202ENST00000574180 1591 ntBASIC19.42■□□□□ 0.7
LHX9Q9NQ69 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LHX9Q9NQ69 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.42■□□□□ 0.7
LHX9Q9NQ69 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LHX9Q9NQ69 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.42■□□□□ 0.7
LHX9Q9NQ69 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LHX9Q9NQ69 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LHX9Q9NQ69 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.42■□□□□ 0.7
LHX9Q9NQ69 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
LHX9Q9NQ69 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.42■□□□□ 0.7
LHX9Q9NQ69 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.42■□□□□ 0.7
LHX9Q9NQ69 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LHX9Q9NQ69 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LHX9Q9NQ69 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.42■□□□□ 0.7
LHX9Q9NQ69 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
LHX9Q9NQ69 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.41■□□□□ 0.7
LHX9Q9NQ69 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LHX9Q9NQ69 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LHX9Q9NQ69 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
LHX9Q9NQ69 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LHX9Q9NQ69 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.41■□□□□ 0.7
LHX9Q9NQ69 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.41■□□□□ 0.7
LHX9Q9NQ69 LINC01521-201ENST00000504184 1943 ntBASIC19.41■□□□□ 0.7
LHX9Q9NQ69 AC020907.5-201ENST00000624372 1936 ntBASIC19.41■□□□□ 0.7
LHX9Q9NQ69 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
LHX9Q9NQ69 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LHX9Q9NQ69 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LHX9Q9NQ69 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LHX9Q9NQ69 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LHX9Q9NQ69 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LHX9Q9NQ69 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
LHX9Q9NQ69 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.41■□□□□ 0.7
LHX9Q9NQ69 AC105020.6-201ENST00000621523 1217 ntBASIC19.41■□□□□ 0.7
LHX9Q9NQ69 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.41■□□□□ 0.7
LHX9Q9NQ69 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LHX9Q9NQ69 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.41■□□□□ 0.7
LHX9Q9NQ69 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LHX9Q9NQ69 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
LHX9Q9NQ69 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
LHX9Q9NQ69 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LHX9Q9NQ69 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LHX9Q9NQ69 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
LHX9Q9NQ69 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.4■□□□□ 0.7
LHX9Q9NQ69 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms