Protein–RNA interactions for Protein: Q9H7V2

SYNDIG1, Synapse differentiation-inducing gene protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNDIG1Q9H7V2 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNDIG1Q9H7V2 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNDIG1Q9H7V2 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.74■□□□□ 0.75
SYNDIG1Q9H7V2 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNDIG1Q9H7V2 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNDIG1Q9H7V2 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SYNDIG1Q9H7V2 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SYNDIG1Q9H7V2 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
SYNDIG1Q9H7V2 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNDIG1Q9H7V2 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNDIG1Q9H7V2 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SYNDIG1Q9H7V2 SNORA78-201ENST00000459373 127 ntBASIC19.73■□□□□ 0.75
SYNDIG1Q9H7V2 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SYNDIG1Q9H7V2 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
SYNDIG1Q9H7V2 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.73■□□□□ 0.75
SYNDIG1Q9H7V2 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNDIG1Q9H7V2 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.73■□□□□ 0.75
SYNDIG1Q9H7V2 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.73■□□□□ 0.75
SYNDIG1Q9H7V2 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SYNDIG1Q9H7V2 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SYNDIG1Q9H7V2 AL121603.2-201ENST00000557373 2117 ntBASIC19.73■□□□□ 0.75
SYNDIG1Q9H7V2 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SYNDIG1Q9H7V2 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNDIG1Q9H7V2 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNDIG1Q9H7V2 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.73■□□□□ 0.75
SYNDIG1Q9H7V2 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SYNDIG1Q9H7V2 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
SYNDIG1Q9H7V2 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.73■□□□□ 0.75
SYNDIG1Q9H7V2 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.73■□□□□ 0.75
SYNDIG1Q9H7V2 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.73■□□□□ 0.75
SYNDIG1Q9H7V2 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.73■□□□□ 0.75
SYNDIG1Q9H7V2 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SYNDIG1Q9H7V2 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.72■□□□□ 0.75
SYNDIG1Q9H7V2 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SYNDIG1Q9H7V2 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.72■□□□□ 0.75
SYNDIG1Q9H7V2 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.72■□□□□ 0.75
SYNDIG1Q9H7V2 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SYNDIG1Q9H7V2 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SYNDIG1Q9H7V2 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SYNDIG1Q9H7V2 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SYNDIG1Q9H7V2 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.72■□□□□ 0.75
SYNDIG1Q9H7V2 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
SYNDIG1Q9H7V2 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SYNDIG1Q9H7V2 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.72■□□□□ 0.75
SYNDIG1Q9H7V2 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SYNDIG1Q9H7V2 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SYNDIG1Q9H7V2 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.72■□□□□ 0.75
SYNDIG1Q9H7V2 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.72■□□□□ 0.75
SYNDIG1Q9H7V2 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SYNDIG1Q9H7V2 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.72■□□□□ 0.75
SYNDIG1Q9H7V2 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.72■□□□□ 0.75
SYNDIG1Q9H7V2 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SYNDIG1Q9H7V2 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SYNDIG1Q9H7V2 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SYNDIG1Q9H7V2 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.72■□□□□ 0.75
SYNDIG1Q9H7V2 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.72■□□□□ 0.75
SYNDIG1Q9H7V2 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.72■□□□□ 0.75
SYNDIG1Q9H7V2 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.72■□□□□ 0.75
SYNDIG1Q9H7V2 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.72■□□□□ 0.75
SYNDIG1Q9H7V2 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SYNDIG1Q9H7V2 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
SYNDIG1Q9H7V2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SYNDIG1Q9H7V2 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SYNDIG1Q9H7V2 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SYNDIG1Q9H7V2 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYNDIG1Q9H7V2 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SYNDIG1Q9H7V2 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.71■□□□□ 0.75
SYNDIG1Q9H7V2 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYNDIG1Q9H7V2 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYNDIG1Q9H7V2 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYNDIG1Q9H7V2 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
SYNDIG1Q9H7V2 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.71■□□□□ 0.75
SYNDIG1Q9H7V2 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SYNDIG1Q9H7V2 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.71■□□□□ 0.75
SYNDIG1Q9H7V2 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SYNDIG1Q9H7V2 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYNDIG1Q9H7V2 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYNDIG1Q9H7V2 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SYNDIG1Q9H7V2 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SYNDIG1Q9H7V2 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SYNDIG1Q9H7V2 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYNDIG1Q9H7V2 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SYNDIG1Q9H7V2 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYNDIG1Q9H7V2 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.7■□□□□ 0.74
SYNDIG1Q9H7V2 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SYNDIG1Q9H7V2 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYNDIG1Q9H7V2 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYNDIG1Q9H7V2 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYNDIG1Q9H7V2 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.7■□□□□ 0.74
SYNDIG1Q9H7V2 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYNDIG1Q9H7V2 AL390719.1-204ENST00000412397 1219 ntBASIC19.7■□□□□ 0.74
SYNDIG1Q9H7V2 AC239809.2-201ENST00000415381 517 ntBASIC19.7■□□□□ 0.74
SYNDIG1Q9H7V2 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SYNDIG1Q9H7V2 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.7■□□□□ 0.74
SYNDIG1Q9H7V2 AL023875.1-201ENST00000640777 796 ntBASIC19.7■□□□□ 0.74
SYNDIG1Q9H7V2 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.7■□□□□ 0.74
SYNDIG1Q9H7V2 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYNDIG1Q9H7V2 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SYNDIG1Q9H7V2 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.7■□□□□ 0.74
SYNDIG1Q9H7V2 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms