Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
SCAF1Q9H7N4 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC29.98■■■□□ 2.39
SCAF1Q9H7N4 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC29.98■■■□□ 2.39
SCAF1Q9H7N4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC29.98■■■□□ 2.39
SCAF1Q9H7N4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC29.98■■■□□ 2.39
SCAF1Q9H7N4 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC29.98■■■□□ 2.39
SCAF1Q9H7N4 KRT17P2-201ENST00000300992 1314 ntBASIC29.98■■■□□ 2.39
SCAF1Q9H7N4 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
SCAF1Q9H7N4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
SCAF1Q9H7N4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC29.98■■■□□ 2.39
SCAF1Q9H7N4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
SCAF1Q9H7N4 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC29.98■■■□□ 2.39
SCAF1Q9H7N4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC29.98■■■□□ 2.39
SCAF1Q9H7N4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
SCAF1Q9H7N4 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC29.98■■■□□ 2.39
SCAF1Q9H7N4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC29.98■■■□□ 2.39
SCAF1Q9H7N4 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
SCAF1Q9H7N4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC29.97■■■□□ 2.39
SCAF1Q9H7N4 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC29.97■■■□□ 2.39
SCAF1Q9H7N4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC29.97■■■□□ 2.39
SCAF1Q9H7N4 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC29.97■■■□□ 2.39
SCAF1Q9H7N4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC29.97■■■□□ 2.39
SCAF1Q9H7N4 RN7SL850P-201ENST00000579959 291 ntBASIC29.97■■■□□ 2.39
SCAF1Q9H7N4 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC29.97■■■□□ 2.39
SCAF1Q9H7N4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
SCAF1Q9H7N4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC29.97■■■□□ 2.39
SCAF1Q9H7N4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC29.97■■■□□ 2.39
SCAF1Q9H7N4 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC29.97■■■□□ 2.39
SCAF1Q9H7N4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC29.97■■■□□ 2.39
SCAF1Q9H7N4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
SCAF1Q9H7N4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
SCAF1Q9H7N4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC29.97■■■□□ 2.39
SCAF1Q9H7N4 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC29.97■■■□□ 2.39
SCAF1Q9H7N4 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC29.96■■■□□ 2.39
SCAF1Q9H7N4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC29.96■■■□□ 2.39
SCAF1Q9H7N4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC29.96■■■□□ 2.39
SCAF1Q9H7N4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
SCAF1Q9H7N4 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
SCAF1Q9H7N4 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
SCAF1Q9H7N4 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC29.96■■■□□ 2.39
SCAF1Q9H7N4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
SCAF1Q9H7N4 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
SCAF1Q9H7N4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC29.96■■■□□ 2.39
SCAF1Q9H7N4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
SCAF1Q9H7N4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC29.96■■■□□ 2.39
SCAF1Q9H7N4 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC29.96■■■□□ 2.39
SCAF1Q9H7N4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
SCAF1Q9H7N4 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC29.96■■■□□ 2.39
SCAF1Q9H7N4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC29.96■■■□□ 2.39
SCAF1Q9H7N4 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC29.96■■■□□ 2.39
SCAF1Q9H7N4 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
SCAF1Q9H7N4 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
SCAF1Q9H7N4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
SCAF1Q9H7N4 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC29.96■■■□□ 2.39
SCAF1Q9H7N4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC29.96■■■□□ 2.39
SCAF1Q9H7N4 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
SCAF1Q9H7N4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
SCAF1Q9H7N4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC29.95■■■□□ 2.39
SCAF1Q9H7N4 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC29.95■■■□□ 2.39
SCAF1Q9H7N4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
SCAF1Q9H7N4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC29.95■■■□□ 2.39
SCAF1Q9H7N4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
SCAF1Q9H7N4 AC098799.1-201ENST00000504752 800 ntBASIC29.95■■■□□ 2.38
SCAF1Q9H7N4 C2orf69P4-201ENST00000565394 541 ntBASIC29.95■■■□□ 2.38
SCAF1Q9H7N4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC29.95■■■□□ 2.38
SCAF1Q9H7N4 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC29.95■■■□□ 2.38
SCAF1Q9H7N4 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC29.94■■■□□ 2.38
SCAF1Q9H7N4 AL353803.4-201ENST00000565882 1934 ntBASIC29.94■■■□□ 2.38
SCAF1Q9H7N4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC29.94■■■□□ 2.38
SCAF1Q9H7N4 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC29.94■■■□□ 2.38
SCAF1Q9H7N4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
SCAF1Q9H7N4 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC29.94■■■□□ 2.38
SCAF1Q9H7N4 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
SCAF1Q9H7N4 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
SCAF1Q9H7N4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC29.94■■■□□ 2.38
SCAF1Q9H7N4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC29.94■■■□□ 2.38
SCAF1Q9H7N4 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC29.94■■■□□ 2.38
SCAF1Q9H7N4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC29.94■■■□□ 2.38
SCAF1Q9H7N4 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC29.94■■■□□ 2.38
SCAF1Q9H7N4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC29.94■■■□□ 2.38
SCAF1Q9H7N4 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC29.94■■■□□ 2.38
SCAF1Q9H7N4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC29.94■■■□□ 2.38
SCAF1Q9H7N4 RN7SL471P-201ENST00000580476 299 ntBASIC29.94■■■□□ 2.38
SCAF1Q9H7N4 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC29.94■■■□□ 2.38
SCAF1Q9H7N4 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC29.94■■■□□ 2.38
SCAF1Q9H7N4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC29.93■■■□□ 2.38
SCAF1Q9H7N4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC29.93■■■□□ 2.38
SCAF1Q9H7N4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC29.93■■■□□ 2.38
SCAF1Q9H7N4 KRT17P3-201ENST00000420566 1262 ntBASIC29.93■■■□□ 2.38
SCAF1Q9H7N4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
SCAF1Q9H7N4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC29.93■■■□□ 2.38
SCAF1Q9H7N4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC29.93■■■□□ 2.38
SCAF1Q9H7N4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
SCAF1Q9H7N4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
SCAF1Q9H7N4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC29.92■■■□□ 2.38
SCAF1Q9H7N4 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC29.92■■■□□ 2.38
SCAF1Q9H7N4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC29.92■■■□□ 2.38
SCAF1Q9H7N4 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
SCAF1Q9H7N4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
SCAF1Q9H7N4 LETM1P2-201ENST00000597330 2178 ntBASIC29.92■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms