Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SH2D4AQ9H788 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SH2D4AQ9H788 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SH2D4AQ9H788 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SH2D4AQ9H788 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SH2D4AQ9H788 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SH2D4AQ9H788 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SH2D4AQ9H788 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
SH2D4AQ9H788 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
SH2D4AQ9H788 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SH2D4AQ9H788 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SH2D4AQ9H788 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SH2D4AQ9H788 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
SH2D4AQ9H788 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SH2D4AQ9H788 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC23.63■■□□□ 1.37
SH2D4AQ9H788 AC239809.2-201ENST00000415381 517 ntBASIC23.63■■□□□ 1.37
SH2D4AQ9H788 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC23.63■■□□□ 1.37
SH2D4AQ9H788 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SH2D4AQ9H788 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC23.63■■□□□ 1.37
SH2D4AQ9H788 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC23.63■■□□□ 1.37
SH2D4AQ9H788 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC23.63■■□□□ 1.37
SH2D4AQ9H788 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
SH2D4AQ9H788 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
SH2D4AQ9H788 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SH2D4AQ9H788 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
SH2D4AQ9H788 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SH2D4AQ9H788 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC23.63■■□□□ 1.37
SH2D4AQ9H788 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC23.63■■□□□ 1.37
SH2D4AQ9H788 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
SH2D4AQ9H788 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC23.63■■□□□ 1.37
SH2D4AQ9H788 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC23.62■■□□□ 1.37
SH2D4AQ9H788 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
SH2D4AQ9H788 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC23.62■■□□□ 1.37
SH2D4AQ9H788 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
SH2D4AQ9H788 AC133681.1-201ENST00000465482 601 ntBASIC23.62■■□□□ 1.37
SH2D4AQ9H788 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
SH2D4AQ9H788 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SH2D4AQ9H788 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SH2D4AQ9H788 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
SH2D4AQ9H788 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC23.62■■□□□ 1.37
SH2D4AQ9H788 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SH2D4AQ9H788 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SH2D4AQ9H788 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SH2D4AQ9H788 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC23.61■■□□□ 1.37
SH2D4AQ9H788 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC23.61■■□□□ 1.37
SH2D4AQ9H788 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC23.61■■□□□ 1.37
SH2D4AQ9H788 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SH2D4AQ9H788 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC23.61■■□□□ 1.37
SH2D4AQ9H788 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC23.61■■□□□ 1.37
SH2D4AQ9H788 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SH2D4AQ9H788 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC23.61■■□□□ 1.37
SH2D4AQ9H788 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SH2D4AQ9H788 LY6E-205ENST00000519611 635 ntTSL 3 BASIC23.61■■□□□ 1.37
SH2D4AQ9H788 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC23.61■■□□□ 1.37
SH2D4AQ9H788 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC23.61■■□□□ 1.37
SH2D4AQ9H788 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC23.61■■□□□ 1.37
SH2D4AQ9H788 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC23.61■■□□□ 1.37
SH2D4AQ9H788 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC23.61■■□□□ 1.37
SH2D4AQ9H788 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SH2D4AQ9H788 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SH2D4AQ9H788 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC23.61■■□□□ 1.37
SH2D4AQ9H788 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SH2D4AQ9H788 AL137060.1-201ENST00000618151 2648 ntBASIC23.6■■□□□ 1.37
SH2D4AQ9H788 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SH2D4AQ9H788 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SH2D4AQ9H788 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SH2D4AQ9H788 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SH2D4AQ9H788 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SH2D4AQ9H788 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC23.6■■□□□ 1.37
SH2D4AQ9H788 AC124016.1-201ENST00000609552 612 ntBASIC23.6■■□□□ 1.37
SH2D4AQ9H788 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SH2D4AQ9H788 AL023875.1-201ENST00000640777 796 ntBASIC23.6■■□□□ 1.37
SH2D4AQ9H788 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SH2D4AQ9H788 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SH2D4AQ9H788 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC23.59■■□□□ 1.37
SH2D4AQ9H788 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC23.59■■□□□ 1.37
SH2D4AQ9H788 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SH2D4AQ9H788 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
SH2D4AQ9H788 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC23.59■■□□□ 1.37
SH2D4AQ9H788 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SH2D4AQ9H788 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SH2D4AQ9H788 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
SH2D4AQ9H788 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC23.59■■□□□ 1.37
SH2D4AQ9H788 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC23.59■■□□□ 1.37
SH2D4AQ9H788 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC23.59■■□□□ 1.37
SH2D4AQ9H788 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC23.59■■□□□ 1.37
SH2D4AQ9H788 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SH2D4AQ9H788 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
SH2D4AQ9H788 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SH2D4AQ9H788 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC23.59■■□□□ 1.37
SH2D4AQ9H788 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SH2D4AQ9H788 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
SH2D4AQ9H788 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
SH2D4AQ9H788 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
SH2D4AQ9H788 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
SH2D4AQ9H788 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SH2D4AQ9H788 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SH2D4AQ9H788 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SH2D4AQ9H788 SERF2-207ENST00000409614 582 ntTSL 2 BASIC23.58■■□□□ 1.37
SH2D4AQ9H788 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms