Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PIF1Q9H611 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PIF1Q9H611 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PIF1Q9H611 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
PIF1Q9H611 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.24■□□□□ 0.67
PIF1Q9H611 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PIF1Q9H611 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.24■□□□□ 0.67
PIF1Q9H611 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PIF1Q9H611 AL354811.1-201ENST00000610286 706 ntBASIC19.24■□□□□ 0.67
PIF1Q9H611 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PIF1Q9H611 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
PIF1Q9H611 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PIF1Q9H611 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PIF1Q9H611 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PIF1Q9H611 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PIF1Q9H611 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PIF1Q9H611 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PIF1Q9H611 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PIF1Q9H611 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PIF1Q9H611 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PIF1Q9H611 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PIF1Q9H611 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PIF1Q9H611 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PIF1Q9H611 AL020996.1-203ENST00000536896 2307 ntBASIC19.23■□□□□ 0.67
PIF1Q9H611 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PIF1Q9H611 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.23■□□□□ 0.67
PIF1Q9H611 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PIF1Q9H611 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PIF1Q9H611 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.23■□□□□ 0.67
PIF1Q9H611 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PIF1Q9H611 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PIF1Q9H611 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PIF1Q9H611 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PIF1Q9H611 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PIF1Q9H611 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.23■□□□□ 0.67
PIF1Q9H611 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PIF1Q9H611 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PIF1Q9H611 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PIF1Q9H611 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.22■□□□□ 0.67
PIF1Q9H611 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PIF1Q9H611 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.22■□□□□ 0.67
PIF1Q9H611 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.22■□□□□ 0.67
PIF1Q9H611 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PIF1Q9H611 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PIF1Q9H611 POU5F1P4-201ENST00000413175 1085 ntBASIC19.22■□□□□ 0.67
PIF1Q9H611 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PIF1Q9H611 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PIF1Q9H611 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.22■□□□□ 0.67
PIF1Q9H611 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.22■□□□□ 0.67
PIF1Q9H611 AC012414.1-201ENST00000556676 535 ntBASIC19.22■□□□□ 0.67
PIF1Q9H611 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PIF1Q9H611 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PIF1Q9H611 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.22■□□□□ 0.67
PIF1Q9H611 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PIF1Q9H611 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
PIF1Q9H611 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PIF1Q9H611 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PIF1Q9H611 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PIF1Q9H611 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PIF1Q9H611 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PIF1Q9H611 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PIF1Q9H611 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PIF1Q9H611 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PIF1Q9H611 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PIF1Q9H611 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PIF1Q9H611 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PIF1Q9H611 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.22■□□□□ 0.67
PIF1Q9H611 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
PIF1Q9H611 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PIF1Q9H611 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PIF1Q9H611 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PIF1Q9H611 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.21■□□□□ 0.67
PIF1Q9H611 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
PIF1Q9H611 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PIF1Q9H611 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
PIF1Q9H611 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PIF1Q9H611 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
PIF1Q9H611 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PIF1Q9H611 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.21■□□□□ 0.67
PIF1Q9H611 TPRG1LP1-201ENST00000598702 760 ntBASIC19.21■□□□□ 0.67
PIF1Q9H611 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.21■□□□□ 0.67
PIF1Q9H611 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PIF1Q9H611 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PIF1Q9H611 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PIF1Q9H611 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PIF1Q9H611 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
PIF1Q9H611 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PIF1Q9H611 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PIF1Q9H611 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.2■□□□□ 0.66
PIF1Q9H611 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PIF1Q9H611 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.2■□□□□ 0.66
PIF1Q9H611 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PIF1Q9H611 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PIF1Q9H611 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.2■□□□□ 0.66
PIF1Q9H611 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PIF1Q9H611 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.2■□□□□ 0.66
PIF1Q9H611 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.2■□□□□ 0.66
PIF1Q9H611 MIR6084-201ENST00000622012 110 ntBASIC19.2■□□□□ 0.66
PIF1Q9H611 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
PIF1Q9H611 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms