Protein–RNA interactions for Protein: Q9H3R0

KDM4C, Lysine-specific demethylase 4C, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4CQ9H3R0 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
KDM4CQ9H3R0 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
KDM4CQ9H3R0 MIR4758-201ENST00000577688 71 ntBASIC21.02■□□□□ 0.96
KDM4CQ9H3R0 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
KDM4CQ9H3R0 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
KDM4CQ9H3R0 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KDM4CQ9H3R0 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
KDM4CQ9H3R0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
KDM4CQ9H3R0 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
KDM4CQ9H3R0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.02■□□□□ 0.95
KDM4CQ9H3R0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
KDM4CQ9H3R0 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
KDM4CQ9H3R0 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KDM4CQ9H3R0 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.01■□□□□ 0.95
KDM4CQ9H3R0 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KDM4CQ9H3R0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KDM4CQ9H3R0 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.01■□□□□ 0.95
KDM4CQ9H3R0 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KDM4CQ9H3R0 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
KDM4CQ9H3R0 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KDM4CQ9H3R0 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.01■□□□□ 0.95
KDM4CQ9H3R0 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.01■□□□□ 0.95
KDM4CQ9H3R0 CD99P1-205ENST00000527459 561 ntBASIC21.01■□□□□ 0.95
KDM4CQ9H3R0 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
KDM4CQ9H3R0 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KDM4CQ9H3R0 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KDM4CQ9H3R0 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KDM4CQ9H3R0 AC061975.6-201ENST00000579045 1553 ntBASIC21.01■□□□□ 0.95
KDM4CQ9H3R0 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
KDM4CQ9H3R0 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
KDM4CQ9H3R0 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21■□□□□ 0.95
KDM4CQ9H3R0 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21■□□□□ 0.95
KDM4CQ9H3R0 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KDM4CQ9H3R0 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KDM4CQ9H3R0 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21■□□□□ 0.95
KDM4CQ9H3R0 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
KDM4CQ9H3R0 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21■□□□□ 0.95
KDM4CQ9H3R0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KDM4CQ9H3R0 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KDM4CQ9H3R0 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KDM4CQ9H3R0 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KDM4CQ9H3R0 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21■□□□□ 0.95
KDM4CQ9H3R0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21■□□□□ 0.95
KDM4CQ9H3R0 KRT18P6-201ENST00000555540 1265 ntBASIC21■□□□□ 0.95
KDM4CQ9H3R0 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21■□□□□ 0.95
KDM4CQ9H3R0 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21■□□□□ 0.95
KDM4CQ9H3R0 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21■□□□□ 0.95
KDM4CQ9H3R0 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
KDM4CQ9H3R0 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21■□□□□ 0.95
KDM4CQ9H3R0 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
KDM4CQ9H3R0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
KDM4CQ9H3R0 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
KDM4CQ9H3R0 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
KDM4CQ9H3R0 PCDHAC2-203ENST00000615316 3011 ntBASIC20.99■□□□□ 0.95
KDM4CQ9H3R0 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.99■□□□□ 0.95
KDM4CQ9H3R0 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KDM4CQ9H3R0 MKRN4P-201ENST00000444706 1521 ntBASIC20.99■□□□□ 0.95
KDM4CQ9H3R0 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
KDM4CQ9H3R0 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.99■□□□□ 0.95
KDM4CQ9H3R0 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
KDM4CQ9H3R0 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.99■□□□□ 0.95
KDM4CQ9H3R0 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.99■□□□□ 0.95
KDM4CQ9H3R0 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.99■□□□□ 0.95
KDM4CQ9H3R0 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.99■□□□□ 0.95
KDM4CQ9H3R0 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.99■□□□□ 0.95
KDM4CQ9H3R0 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KDM4CQ9H3R0 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
KDM4CQ9H3R0 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
KDM4CQ9H3R0 BX323043.1-201ENST00000641006 1765 ntBASIC20.99■□□□□ 0.95
KDM4CQ9H3R0 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
KDM4CQ9H3R0 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
KDM4CQ9H3R0 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
KDM4CQ9H3R0 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KDM4CQ9H3R0 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
KDM4CQ9H3R0 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KDM4CQ9H3R0 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
KDM4CQ9H3R0 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KDM4CQ9H3R0 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
KDM4CQ9H3R0 SMG8-203ENST00000578922 2178 ntBASIC20.98■□□□□ 0.95
KDM4CQ9H3R0 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KDM4CQ9H3R0 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KDM4CQ9H3R0 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
KDM4CQ9H3R0 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KDM4CQ9H3R0 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.98■□□□□ 0.95
KDM4CQ9H3R0 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.98■□□□□ 0.95
KDM4CQ9H3R0 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KDM4CQ9H3R0 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.98■□□□□ 0.95
KDM4CQ9H3R0 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
KDM4CQ9H3R0 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
KDM4CQ9H3R0 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.98■□□□□ 0.95
KDM4CQ9H3R0 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.98■□□□□ 0.95
KDM4CQ9H3R0 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KDM4CQ9H3R0 AC018445.3-201ENST00000624177 1945 ntBASIC20.98■□□□□ 0.95
KDM4CQ9H3R0 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KDM4CQ9H3R0 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
KDM4CQ9H3R0 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KDM4CQ9H3R0 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KDM4CQ9H3R0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
KDM4CQ9H3R0 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KDM4CQ9H3R0 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms