Protein–RNA interactions for Protein: Q9H267

VPS33B, Vacuolar protein sorting-associated protein 33B, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33BQ9H267 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
VPS33BQ9H267 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC24.5■■□□□ 1.51
VPS33BQ9H267 AL137013.1-201ENST00000432946 1228 ntBASIC24.5■■□□□ 1.51
VPS33BQ9H267 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC24.5■■□□□ 1.51
VPS33BQ9H267 RNF146-204ENST00000476956 884 ntTSL 2 BASIC24.5■■□□□ 1.51
VPS33BQ9H267 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC24.5■■□□□ 1.51
VPS33BQ9H267 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC24.5■■□□□ 1.51
VPS33BQ9H267 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC24.5■■□□□ 1.51
VPS33BQ9H267 CYP2D8P-201ENST00000433633 1490 ntBASIC24.5■■□□□ 1.51
VPS33BQ9H267 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC24.5■■□□□ 1.51
VPS33BQ9H267 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
VPS33BQ9H267 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
VPS33BQ9H267 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
VPS33BQ9H267 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
VPS33BQ9H267 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC24.49■■□□□ 1.51
VPS33BQ9H267 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC24.49■■□□□ 1.51
VPS33BQ9H267 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
VPS33BQ9H267 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC24.49■■□□□ 1.51
VPS33BQ9H267 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC24.49■■□□□ 1.51
VPS33BQ9H267 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
VPS33BQ9H267 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC24.49■■□□□ 1.51
VPS33BQ9H267 STAC-204ENST00000457375 1366 ntTSL 2 BASIC24.49■■□□□ 1.51
VPS33BQ9H267 PARN-205ENST00000539279 1557 ntTSL 2 BASIC24.49■■□□□ 1.51
VPS33BQ9H267 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
VPS33BQ9H267 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
VPS33BQ9H267 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
VPS33BQ9H267 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
VPS33BQ9H267 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC24.49■■□□□ 1.51
VPS33BQ9H267 ME2-206ENST00000638410 2289 ntTSL 5 BASIC24.49■■□□□ 1.51
VPS33BQ9H267 ME2-210ENST00000639255 2262 ntTSL 5 BASIC24.49■■□□□ 1.51
VPS33BQ9H267 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
VPS33BQ9H267 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
VPS33BQ9H267 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC24.48■■□□□ 1.51
VPS33BQ9H267 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
VPS33BQ9H267 HLA-G-202ENST00000376815 851 ntBASIC24.48■■□□□ 1.51
VPS33BQ9H267 HLA-G-203ENST00000376818 1127 ntBASIC24.48■■□□□ 1.51
VPS33BQ9H267 KRT16P1-201ENST00000399124 1418 ntBASIC24.48■■□□□ 1.51
VPS33BQ9H267 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC24.48■■□□□ 1.51
VPS33BQ9H267 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
VPS33BQ9H267 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
VPS33BQ9H267 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC24.48■■□□□ 1.51
VPS33BQ9H267 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
VPS33BQ9H267 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
VPS33BQ9H267 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
VPS33BQ9H267 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
VPS33BQ9H267 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC24.47■■□□□ 1.51
VPS33BQ9H267 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
VPS33BQ9H267 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC24.47■■□□□ 1.51
VPS33BQ9H267 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
VPS33BQ9H267 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
VPS33BQ9H267 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
VPS33BQ9H267 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
VPS33BQ9H267 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC24.47■■□□□ 1.51
VPS33BQ9H267 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
VPS33BQ9H267 SLC25A3P1-201ENST00000443844 931 ntBASIC24.47■■□□□ 1.51
VPS33BQ9H267 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
VPS33BQ9H267 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC24.47■■□□□ 1.51
VPS33BQ9H267 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC24.47■■□□□ 1.51
VPS33BQ9H267 CR392000.1-201ENST00000624770 1228 ntBASIC24.47■■□□□ 1.51
VPS33BQ9H267 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
VPS33BQ9H267 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
VPS33BQ9H267 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
VPS33BQ9H267 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC24.47■■□□□ 1.51
VPS33BQ9H267 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
VPS33BQ9H267 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
VPS33BQ9H267 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24.46■■□□□ 1.51
VPS33BQ9H267 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
VPS33BQ9H267 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
VPS33BQ9H267 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
VPS33BQ9H267 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC24.46■■□□□ 1.51
VPS33BQ9H267 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC24.46■■□□□ 1.51
VPS33BQ9H267 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
VPS33BQ9H267 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
VPS33BQ9H267 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
VPS33BQ9H267 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
VPS33BQ9H267 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
VPS33BQ9H267 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
VPS33BQ9H267 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
VPS33BQ9H267 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC24.45■■□□□ 1.5
VPS33BQ9H267 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
VPS33BQ9H267 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
VPS33BQ9H267 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
VPS33BQ9H267 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
VPS33BQ9H267 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC24.45■■□□□ 1.5
VPS33BQ9H267 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
VPS33BQ9H267 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
VPS33BQ9H267 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
VPS33BQ9H267 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC24.45■■□□□ 1.5
VPS33BQ9H267 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
VPS33BQ9H267 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC24.44■■□□□ 1.5
VPS33BQ9H267 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
VPS33BQ9H267 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
VPS33BQ9H267 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
VPS33BQ9H267 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
VPS33BQ9H267 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
VPS33BQ9H267 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC24.44■■□□□ 1.5
VPS33BQ9H267 TMA16-209ENST00000513272 803 ntTSL 2 BASIC24.44■■□□□ 1.5
VPS33BQ9H267 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC24.44■■□□□ 1.5
VPS33BQ9H267 CFL2-205ENST00000555765 632 ntTSL 2 BASIC24.44■■□□□ 1.5
VPS33BQ9H267 RBM42-202ENST00000586618 771 ntTSL 3 BASIC24.44■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms