Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SPTBN4Q9H254 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SPTBN4Q9H254 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.5■□□□□ 0.71
SPTBN4Q9H254 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.5■□□□□ 0.71
SPTBN4Q9H254 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.5■□□□□ 0.71
SPTBN4Q9H254 IFNL4P1-201ENST00000607083 540 ntBASIC19.5■□□□□ 0.71
SPTBN4Q9H254 AC083849.1-201ENST00000615227 514 ntBASIC19.5■□□□□ 0.71
SPTBN4Q9H254 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SPTBN4Q9H254 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SPTBN4Q9H254 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SPTBN4Q9H254 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SPTBN4Q9H254 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SPTBN4Q9H254 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
SPTBN4Q9H254 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SPTBN4Q9H254 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SPTBN4Q9H254 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SPTBN4Q9H254 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.49■□□□□ 0.71
SPTBN4Q9H254 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.49■□□□□ 0.71
SPTBN4Q9H254 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
SPTBN4Q9H254 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SPTBN4Q9H254 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.49■□□□□ 0.71
SPTBN4Q9H254 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.49■□□□□ 0.71
SPTBN4Q9H254 AC104692.2-201ENST00000603054 253 ntBASIC19.49■□□□□ 0.71
SPTBN4Q9H254 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SPTBN4Q9H254 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
SPTBN4Q9H254 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SPTBN4Q9H254 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SPTBN4Q9H254 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.49■□□□□ 0.71
SPTBN4Q9H254 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.49■□□□□ 0.71
SPTBN4Q9H254 AC097488.1-201ENST00000507834 756 ntBASIC19.49■□□□□ 0.71
SPTBN4Q9H254 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SPTBN4Q9H254 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SPTBN4Q9H254 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SPTBN4Q9H254 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.48■□□□□ 0.71
SPTBN4Q9H254 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.48■□□□□ 0.71
SPTBN4Q9H254 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.48■□□□□ 0.71
SPTBN4Q9H254 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.48■□□□□ 0.71
SPTBN4Q9H254 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.48■□□□□ 0.71
SPTBN4Q9H254 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.48■□□□□ 0.71
SPTBN4Q9H254 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.48■□□□□ 0.71
SPTBN4Q9H254 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SPTBN4Q9H254 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SPTBN4Q9H254 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.48■□□□□ 0.71
SPTBN4Q9H254 PMS2P1-201ENST00000431037 1228 ntBASIC19.48■□□□□ 0.71
SPTBN4Q9H254 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.48■□□□□ 0.71
SPTBN4Q9H254 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.48■□□□□ 0.71
SPTBN4Q9H254 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.48■□□□□ 0.71
SPTBN4Q9H254 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SPTBN4Q9H254 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SPTBN4Q9H254 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SPTBN4Q9H254 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SPTBN4Q9H254 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SPTBN4Q9H254 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SPTBN4Q9H254 B3GAT3P1-201ENST00000471720 806 ntBASIC19.47■□□□□ 0.71
SPTBN4Q9H254 VENTXP5-201ENST00000523979 775 ntBASIC19.47■□□□□ 0.71
SPTBN4Q9H254 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.47■□□□□ 0.71
SPTBN4Q9H254 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
SPTBN4Q9H254 DGCR10-201ENST00000609839 495 ntBASIC19.47■□□□□ 0.71
SPTBN4Q9H254 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SPTBN4Q9H254 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SPTBN4Q9H254 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
SPTBN4Q9H254 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SPTBN4Q9H254 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SPTBN4Q9H254 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SPTBN4Q9H254 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.47■□□□□ 0.71
SPTBN4Q9H254 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.47■□□□□ 0.71
SPTBN4Q9H254 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SPTBN4Q9H254 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SPTBN4Q9H254 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SPTBN4Q9H254 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SPTBN4Q9H254 EMBP1-201ENST00000458200 901 ntBASIC19.46■□□□□ 0.71
SPTBN4Q9H254 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SPTBN4Q9H254 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.46■□□□□ 0.71
SPTBN4Q9H254 NPAP1P7-201ENST00000613027 823 ntBASIC19.46■□□□□ 0.71
SPTBN4Q9H254 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPTBN4Q9H254 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPTBN4Q9H254 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.46■□□□□ 0.71
SPTBN4Q9H254 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.46■□□□□ 0.71
SPTBN4Q9H254 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.46■□□□□ 0.71
SPTBN4Q9H254 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPTBN4Q9H254 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPTBN4Q9H254 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPTBN4Q9H254 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPTBN4Q9H254 AC092053.2-201ENST00000640557 1818 ntBASIC19.45■□□□□ 0.7
SPTBN4Q9H254 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPTBN4Q9H254 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.45■□□□□ 0.7
SPTBN4Q9H254 AC011506.1-201ENST00000474329 610 ntBASIC19.45■□□□□ 0.7
SPTBN4Q9H254 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
SPTBN4Q9H254 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.45■□□□□ 0.7
SPTBN4Q9H254 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.45■□□□□ 0.7
SPTBN4Q9H254 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SPTBN4Q9H254 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPTBN4Q9H254 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPTBN4Q9H254 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPTBN4Q9H254 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPTBN4Q9H254 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SPTBN4Q9H254 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPTBN4Q9H254 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SPTBN4Q9H254 MIR3180-1-201ENST00000580374 94 ntBASIC19.45■□□□□ 0.7
SPTBN4Q9H254 MIR3180-3-201ENST00000584616 94 ntBASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms