Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
CYSTM1Q9H1C7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC11.83□□□□□ -0.52
CYSTM1Q9H1C7 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CYSTM1Q9H1C7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CYSTM1Q9H1C7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
CYSTM1Q9H1C7 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CYSTM1Q9H1C7 PCDHA1-201ENST00000378133 2726 ntBASIC11.83□□□□□ -0.52
CYSTM1Q9H1C7 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CYSTM1Q9H1C7 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CYSTM1Q9H1C7 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CYSTM1Q9H1C7 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CYSTM1Q9H1C7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CYSTM1Q9H1C7 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC11.83□□□□□ -0.52
CYSTM1Q9H1C7 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
CYSTM1Q9H1C7 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CYSTM1Q9H1C7 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CYSTM1Q9H1C7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CYSTM1Q9H1C7 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC11.83□□□□□ -0.52
CYSTM1Q9H1C7 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
CYSTM1Q9H1C7 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC11.83□□□□□ -0.52
CYSTM1Q9H1C7 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
CYSTM1Q9H1C7 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CYSTM1Q9H1C7 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CYSTM1Q9H1C7 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
CYSTM1Q9H1C7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
CYSTM1Q9H1C7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
CYSTM1Q9H1C7 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC11.83□□□□□ -0.52
CYSTM1Q9H1C7 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CYSTM1Q9H1C7 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CYSTM1Q9H1C7 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
CYSTM1Q9H1C7 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC11.83□□□□□ -0.52
CYSTM1Q9H1C7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CYSTM1Q9H1C7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC11.83□□□□□ -0.52
CYSTM1Q9H1C7 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CYSTM1Q9H1C7 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
CYSTM1Q9H1C7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC11.82□□□□□ -0.52
CYSTM1Q9H1C7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC11.82□□□□□ -0.52
CYSTM1Q9H1C7 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CYSTM1Q9H1C7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
CYSTM1Q9H1C7 MYB-242ENST00000618728 3545 ntTSL 5 BASIC11.82□□□□□ -0.52
CYSTM1Q9H1C7 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC11.82□□□□□ -0.52
CYSTM1Q9H1C7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
CYSTM1Q9H1C7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CYSTM1Q9H1C7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CYSTM1Q9H1C7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
CYSTM1Q9H1C7 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC11.82□□□□□ -0.52
CYSTM1Q9H1C7 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CYSTM1Q9H1C7 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CYSTM1Q9H1C7 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
CYSTM1Q9H1C7 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC11.82□□□□□ -0.52
CYSTM1Q9H1C7 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CYSTM1Q9H1C7 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC11.82□□□□□ -0.52
CYSTM1Q9H1C7 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CYSTM1Q9H1C7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
CYSTM1Q9H1C7 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
CYSTM1Q9H1C7 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CYSTM1Q9H1C7 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
CYSTM1Q9H1C7 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
CYSTM1Q9H1C7 SIRPAP1-201ENST00000448467 1770 ntBASIC11.82□□□□□ -0.52
CYSTM1Q9H1C7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CYSTM1Q9H1C7 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
CYSTM1Q9H1C7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC11.81□□□□□ -0.52
CYSTM1Q9H1C7 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CYSTM1Q9H1C7 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
CYSTM1Q9H1C7 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
CYSTM1Q9H1C7 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
CYSTM1Q9H1C7 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
CYSTM1Q9H1C7 MKRN4P-201ENST00000444706 1521 ntBASIC11.81□□□□□ -0.52
CYSTM1Q9H1C7 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC11.81□□□□□ -0.52
CYSTM1Q9H1C7 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
CYSTM1Q9H1C7 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CYSTM1Q9H1C7 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CYSTM1Q9H1C7 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CYSTM1Q9H1C7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
CYSTM1Q9H1C7 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CYSTM1Q9H1C7 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC11.81□□□□□ -0.52
CYSTM1Q9H1C7 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
CYSTM1Q9H1C7 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CYSTM1Q9H1C7 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CYSTM1Q9H1C7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC11.81□□□□□ -0.52
CYSTM1Q9H1C7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC11.81□□□□□ -0.52
CYSTM1Q9H1C7 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CYSTM1Q9H1C7 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
CYSTM1Q9H1C7 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CYSTM1Q9H1C7 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CYSTM1Q9H1C7 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC11.81□□□□□ -0.52
CYSTM1Q9H1C7 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CYSTM1Q9H1C7 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CYSTM1Q9H1C7 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CYSTM1Q9H1C7 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC11.81□□□□□ -0.52
CYSTM1Q9H1C7 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CYSTM1Q9H1C7 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
CYSTM1Q9H1C7 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CYSTM1Q9H1C7 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CYSTM1Q9H1C7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CYSTM1Q9H1C7 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC11.8□□□□□ -0.52
CYSTM1Q9H1C7 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CYSTM1Q9H1C7 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CYSTM1Q9H1C7 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
CYSTM1Q9H1C7 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms