Protein–RNA interactions for Protein: Q9H0U4

RAB1B, Ras-related protein Rab-1B, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1BQ9H0U4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
RAB1BQ9H0U4 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB1BQ9H0U4 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB1BQ9H0U4 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAB1BQ9H0U4 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RAB1BQ9H0U4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.13■□□□□ 0.33
RAB1BQ9H0U4 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.13■□□□□ 0.33
RAB1BQ9H0U4 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.13■□□□□ 0.33
RAB1BQ9H0U4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB1BQ9H0U4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.13■□□□□ 0.33
RAB1BQ9H0U4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
RAB1BQ9H0U4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAB1BQ9H0U4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB1BQ9H0U4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB1BQ9H0U4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB1BQ9H0U4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB1BQ9H0U4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB1BQ9H0U4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB1BQ9H0U4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB1BQ9H0U4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB1BQ9H0U4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RAB1BQ9H0U4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB1BQ9H0U4 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RAB1BQ9H0U4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
RAB1BQ9H0U4 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB1BQ9H0U4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB1BQ9H0U4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB1BQ9H0U4 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB1BQ9H0U4 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RAB1BQ9H0U4 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.12■□□□□ 0.33
RAB1BQ9H0U4 RPS2P4-201ENST00000476944 856 ntBASIC17.12■□□□□ 0.33
RAB1BQ9H0U4 AC023632.3-201ENST00000521633 145 ntBASIC17.12■□□□□ 0.33
RAB1BQ9H0U4 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.12■□□□□ 0.33
RAB1BQ9H0U4 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RAB1BQ9H0U4 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB1BQ9H0U4 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB1BQ9H0U4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RAB1BQ9H0U4 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB1BQ9H0U4 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB1BQ9H0U4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB1BQ9H0U4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB1BQ9H0U4 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB1BQ9H0U4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RAB1BQ9H0U4 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB1BQ9H0U4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB1BQ9H0U4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB1BQ9H0U4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB1BQ9H0U4 MIR718-201ENST00000390190 70 ntBASIC17.11■□□□□ 0.33
RAB1BQ9H0U4 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.11■□□□□ 0.33
RAB1BQ9H0U4 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB1BQ9H0U4 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
RAB1BQ9H0U4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
RAB1BQ9H0U4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB1BQ9H0U4 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB1BQ9H0U4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB1BQ9H0U4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.11■□□□□ 0.33
RAB1BQ9H0U4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB1BQ9H0U4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
RAB1BQ9H0U4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB1BQ9H0U4 FEM1AP4-201ENST00000443167 1987 ntBASIC17.11■□□□□ 0.33
RAB1BQ9H0U4 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB1BQ9H0U4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB1BQ9H0U4 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB1BQ9H0U4 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB1BQ9H0U4 LINC00565-201ENST00000562710 2331 ntBASIC17.1■□□□□ 0.33
RAB1BQ9H0U4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RAB1BQ9H0U4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB1BQ9H0U4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB1BQ9H0U4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB1BQ9H0U4 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.1■□□□□ 0.33
RAB1BQ9H0U4 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB1BQ9H0U4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB1BQ9H0U4 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.1■□□□□ 0.33
RAB1BQ9H0U4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.1■□□□□ 0.33
RAB1BQ9H0U4 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.1■□□□□ 0.33
RAB1BQ9H0U4 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB1BQ9H0U4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RAB1BQ9H0U4 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB1BQ9H0U4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB1BQ9H0U4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB1BQ9H0U4 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB1BQ9H0U4 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB1BQ9H0U4 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB1BQ9H0U4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB1BQ9H0U4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RAB1BQ9H0U4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB1BQ9H0U4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB1BQ9H0U4 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB1BQ9H0U4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB1BQ9H0U4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB1BQ9H0U4 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB1BQ9H0U4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB1BQ9H0U4 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RAB1BQ9H0U4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB1BQ9H0U4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RAB1BQ9H0U4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB1BQ9H0U4 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.09■□□□□ 0.33
RAB1BQ9H0U4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.09■□□□□ 0.33
RAB1BQ9H0U4 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.09■□□□□ 0.33
RAB1BQ9H0U4 AC008550.1-201ENST00000511500 884 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms