Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 FAM21FP-204ENST00000608637 956 ntBASIC24.09■■□□□ 1.45
UPF3BQ9BZI7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC24.09■■□□□ 1.45
UPF3BQ9BZI7 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC24.09■■□□□ 1.45
UPF3BQ9BZI7 WWOX-218ENST00000627394 894 ntTSL 5 BASIC24.09■■□□□ 1.45
UPF3BQ9BZI7 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
UPF3BQ9BZI7 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC24.09■■□□□ 1.45
UPF3BQ9BZI7 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
UPF3BQ9BZI7 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC24.09■■□□□ 1.45
UPF3BQ9BZI7 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
UPF3BQ9BZI7 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
UPF3BQ9BZI7 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
UPF3BQ9BZI7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
UPF3BQ9BZI7 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC24.09■■□□□ 1.45
UPF3BQ9BZI7 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC24.09■■□□□ 1.45
UPF3BQ9BZI7 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
UPF3BQ9BZI7 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
UPF3BQ9BZI7 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC24.08■■□□□ 1.45
UPF3BQ9BZI7 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC24.08■■□□□ 1.45
UPF3BQ9BZI7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
UPF3BQ9BZI7 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
UPF3BQ9BZI7 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC24.08■■□□□ 1.45
UPF3BQ9BZI7 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
UPF3BQ9BZI7 AC011767.1-201ENST00000617410 1153 ntBASIC24.08■■□□□ 1.45
UPF3BQ9BZI7 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC24.08■■□□□ 1.45
UPF3BQ9BZI7 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
UPF3BQ9BZI7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC24.08■■□□□ 1.45
UPF3BQ9BZI7 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.44
UPF3BQ9BZI7 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC24.08■■□□□ 1.44
UPF3BQ9BZI7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
UPF3BQ9BZI7 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
UPF3BQ9BZI7 DENND3-207ENST00000518347 850 ntTSL 2 BASIC24.07■■□□□ 1.44
UPF3BQ9BZI7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC24.07■■□□□ 1.44
UPF3BQ9BZI7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
UPF3BQ9BZI7 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
UPF3BQ9BZI7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC24.07■■□□□ 1.44
UPF3BQ9BZI7 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC24.07■■□□□ 1.44
UPF3BQ9BZI7 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
UPF3BQ9BZI7 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC24.07■■□□□ 1.44
UPF3BQ9BZI7 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC24.07■■□□□ 1.44
UPF3BQ9BZI7 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC24.07■■□□□ 1.44
UPF3BQ9BZI7 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC24.07■■□□□ 1.44
UPF3BQ9BZI7 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
UPF3BQ9BZI7 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
UPF3BQ9BZI7 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
UPF3BQ9BZI7 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC24.06■■□□□ 1.44
UPF3BQ9BZI7 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
UPF3BQ9BZI7 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
UPF3BQ9BZI7 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
UPF3BQ9BZI7 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
UPF3BQ9BZI7 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC24.06■■□□□ 1.44
UPF3BQ9BZI7 CASP6-205ENST00000505486 538 ntTSL 4 BASIC24.06■■□□□ 1.44
UPF3BQ9BZI7 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC24.06■■□□□ 1.44
UPF3BQ9BZI7 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
UPF3BQ9BZI7 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC24.06■■□□□ 1.44
UPF3BQ9BZI7 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
UPF3BQ9BZI7 CYP21A1P-202ENST00000354927 1481 ntBASIC24.06■■□□□ 1.44
UPF3BQ9BZI7 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
UPF3BQ9BZI7 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC24.06■■□□□ 1.44
UPF3BQ9BZI7 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
UPF3BQ9BZI7 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
UPF3BQ9BZI7 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC24.05■■□□□ 1.44
UPF3BQ9BZI7 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC24.05■■□□□ 1.44
UPF3BQ9BZI7 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
UPF3BQ9BZI7 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
UPF3BQ9BZI7 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
UPF3BQ9BZI7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
UPF3BQ9BZI7 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC24.05■■□□□ 1.44
UPF3BQ9BZI7 AC004911.1-201ENST00000416316 871 ntBASIC24.05■■□□□ 1.44
UPF3BQ9BZI7 CNN2P6-201ENST00000439038 900 ntBASIC24.05■■□□□ 1.44
UPF3BQ9BZI7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC24.05■■□□□ 1.44
UPF3BQ9BZI7 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC24.05■■□□□ 1.44
UPF3BQ9BZI7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC24.05■■□□□ 1.44
UPF3BQ9BZI7 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC24.05■■□□□ 1.44
UPF3BQ9BZI7 AC092437.1-201ENST00000624794 1048 ntBASIC24.05■■□□□ 1.44
UPF3BQ9BZI7 AC013268.1-206ENST00000638368 961 ntBASIC24.05■■□□□ 1.44
UPF3BQ9BZI7 AC112229.1-201ENST00000639295 961 ntBASIC24.05■■□□□ 1.44
UPF3BQ9BZI7 STK25-205ENST00000405883 1904 ntTSL 2 BASIC24.05■■□□□ 1.44
UPF3BQ9BZI7 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
UPF3BQ9BZI7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC24.05■■□□□ 1.44
UPF3BQ9BZI7 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
UPF3BQ9BZI7 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
UPF3BQ9BZI7 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
UPF3BQ9BZI7 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC24.04■■□□□ 1.44
UPF3BQ9BZI7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
UPF3BQ9BZI7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC24.04■■□□□ 1.44
UPF3BQ9BZI7 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC24.04■■□□□ 1.44
UPF3BQ9BZI7 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC24.04■■□□□ 1.44
UPF3BQ9BZI7 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
UPF3BQ9BZI7 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC24.04■■□□□ 1.44
UPF3BQ9BZI7 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
UPF3BQ9BZI7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC24.04■■□□□ 1.44
UPF3BQ9BZI7 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
UPF3BQ9BZI7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
UPF3BQ9BZI7 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
UPF3BQ9BZI7 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC24.03■■□□□ 1.44
UPF3BQ9BZI7 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
UPF3BQ9BZI7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
UPF3BQ9BZI7 AC087633.2-202ENST00000565166 1439 ntBASIC24.03■■□□□ 1.44
UPF3BQ9BZI7 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
UPF3BQ9BZI7 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC24.03■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms