Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RSPO3Q9BXY4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RSPO3Q9BXY4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RSPO3Q9BXY4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RSPO3Q9BXY4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
RSPO3Q9BXY4 CDV3P1-201ENST00000471403 739 ntBASIC18.62■□□□□ 0.57
RSPO3Q9BXY4 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.62■□□□□ 0.57
RSPO3Q9BXY4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.62■□□□□ 0.57
RSPO3Q9BXY4 DUX4L16-201ENST00000555130 1264 ntBASIC18.62■□□□□ 0.57
RSPO3Q9BXY4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.62■□□□□ 0.57
RSPO3Q9BXY4 AL356652.1-201ENST00000615962 565 ntBASIC18.62■□□□□ 0.57
RSPO3Q9BXY4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.62■□□□□ 0.57
RSPO3Q9BXY4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.62■□□□□ 0.57
RSPO3Q9BXY4 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RSPO3Q9BXY4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RSPO3Q9BXY4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
RSPO3Q9BXY4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.62■□□□□ 0.57
RSPO3Q9BXY4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RSPO3Q9BXY4 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.62■□□□□ 0.57
RSPO3Q9BXY4 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RSPO3Q9BXY4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RSPO3Q9BXY4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RSPO3Q9BXY4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RSPO3Q9BXY4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RSPO3Q9BXY4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RSPO3Q9BXY4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RSPO3Q9BXY4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RSPO3Q9BXY4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RSPO3Q9BXY4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RSPO3Q9BXY4 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.61■□□□□ 0.57
RSPO3Q9BXY4 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RSPO3Q9BXY4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.61■□□□□ 0.57
RSPO3Q9BXY4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.61■□□□□ 0.57
RSPO3Q9BXY4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.61■□□□□ 0.57
RSPO3Q9BXY4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RSPO3Q9BXY4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.61■□□□□ 0.57
RSPO3Q9BXY4 AC007322.4-201ENST00000509611 723 ntBASIC18.61■□□□□ 0.57
RSPO3Q9BXY4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.61■□□□□ 0.57
RSPO3Q9BXY4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RSPO3Q9BXY4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RSPO3Q9BXY4 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RSPO3Q9BXY4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
RSPO3Q9BXY4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RSPO3Q9BXY4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RSPO3Q9BXY4 AC116562.4-201ENST00000641316 2276 ntBASIC18.61■□□□□ 0.57
RSPO3Q9BXY4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.61■□□□□ 0.57
RSPO3Q9BXY4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RSPO3Q9BXY4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
RSPO3Q9BXY4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RSPO3Q9BXY4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.6■□□□□ 0.57
RSPO3Q9BXY4 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RSPO3Q9BXY4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RSPO3Q9BXY4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RSPO3Q9BXY4 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RSPO3Q9BXY4 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.6■□□□□ 0.57
RSPO3Q9BXY4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.6■□□□□ 0.57
RSPO3Q9BXY4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RSPO3Q9BXY4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RSPO3Q9BXY4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RSPO3Q9BXY4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RSPO3Q9BXY4 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RSPO3Q9BXY4 AC068338.2-201ENST00000563278 1430 ntBASIC18.59■□□□□ 0.57
RSPO3Q9BXY4 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RSPO3Q9BXY4 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
RSPO3Q9BXY4 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.59■□□□□ 0.57
RSPO3Q9BXY4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.59■□□□□ 0.57
RSPO3Q9BXY4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RSPO3Q9BXY4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RSPO3Q9BXY4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.59■□□□□ 0.57
RSPO3Q9BXY4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.59■□□□□ 0.57
RSPO3Q9BXY4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.59■□□□□ 0.57
RSPO3Q9BXY4 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RSPO3Q9BXY4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
RSPO3Q9BXY4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RSPO3Q9BXY4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RSPO3Q9BXY4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
RSPO3Q9BXY4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RSPO3Q9BXY4 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RSPO3Q9BXY4 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RSPO3Q9BXY4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RSPO3Q9BXY4 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.57
RSPO3Q9BXY4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.58■□□□□ 0.56
RSPO3Q9BXY4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RSPO3Q9BXY4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RSPO3Q9BXY4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RSPO3Q9BXY4 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RSPO3Q9BXY4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.58■□□□□ 0.56
RSPO3Q9BXY4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.58■□□□□ 0.56
RSPO3Q9BXY4 AC006015.1-201ENST00000429970 570 ntBASIC18.58■□□□□ 0.56
RSPO3Q9BXY4 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.58■□□□□ 0.56
RSPO3Q9BXY4 AL162412.1-201ENST00000567129 965 ntBASIC18.58■□□□□ 0.56
RSPO3Q9BXY4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.58■□□□□ 0.56
RSPO3Q9BXY4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.58■□□□□ 0.56
RSPO3Q9BXY4 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RSPO3Q9BXY4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RSPO3Q9BXY4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RSPO3Q9BXY4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RSPO3Q9BXY4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
RSPO3Q9BXY4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RSPO3Q9BXY4 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms