Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SEC22CQ9BRL7 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SEC22CQ9BRL7 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SEC22CQ9BRL7 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SEC22CQ9BRL7 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SEC22CQ9BRL7 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.06■□□□□ 0.32
SEC22CQ9BRL7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SEC22CQ9BRL7 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SEC22CQ9BRL7 ATP5G2P3-201ENST00000429083 425 ntBASIC17.06■□□□□ 0.32
SEC22CQ9BRL7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.06■□□□□ 0.32
SEC22CQ9BRL7 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.06■□□□□ 0.32
SEC22CQ9BRL7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC17.06■□□□□ 0.32
SEC22CQ9BRL7 AC010525.1-201ENST00000585559 441 ntBASIC17.06■□□□□ 0.32
SEC22CQ9BRL7 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SEC22CQ9BRL7 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SEC22CQ9BRL7 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.06■□□□□ 0.32
SEC22CQ9BRL7 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SEC22CQ9BRL7 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SEC22CQ9BRL7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SEC22CQ9BRL7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SEC22CQ9BRL7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SEC22CQ9BRL7 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SEC22CQ9BRL7 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SEC22CQ9BRL7 AL049812.1-201ENST00000432563 2267 ntBASIC17.05■□□□□ 0.32
SEC22CQ9BRL7 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
SEC22CQ9BRL7 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SEC22CQ9BRL7 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.05■□□□□ 0.32
SEC22CQ9BRL7 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SEC22CQ9BRL7 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.05■□□□□ 0.32
SEC22CQ9BRL7 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SEC22CQ9BRL7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SEC22CQ9BRL7 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SEC22CQ9BRL7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SEC22CQ9BRL7 TFPT-201ENST00000391757 774 ntTSL 5 BASIC17.05■□□□□ 0.32
SEC22CQ9BRL7 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SEC22CQ9BRL7 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
SEC22CQ9BRL7 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SEC22CQ9BRL7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SEC22CQ9BRL7 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SEC22CQ9BRL7 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SEC22CQ9BRL7 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SEC22CQ9BRL7 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.05■□□□□ 0.32
SEC22CQ9BRL7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SEC22CQ9BRL7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SEC22CQ9BRL7 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SEC22CQ9BRL7 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SEC22CQ9BRL7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
SEC22CQ9BRL7 Z82202.1-201ENST00000623446 1880 ntBASIC17.05■□□□□ 0.32
SEC22CQ9BRL7 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.05■□□□□ 0.32
SEC22CQ9BRL7 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SEC22CQ9BRL7 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SEC22CQ9BRL7 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SEC22CQ9BRL7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SEC22CQ9BRL7 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SEC22CQ9BRL7 TREX1-205ENST00000625293 1783 ntBASIC17.05■□□□□ 0.32
SEC22CQ9BRL7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SEC22CQ9BRL7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SEC22CQ9BRL7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SEC22CQ9BRL7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
SEC22CQ9BRL7 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SEC22CQ9BRL7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SEC22CQ9BRL7 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SEC22CQ9BRL7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SEC22CQ9BRL7 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SEC22CQ9BRL7 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SEC22CQ9BRL7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
SEC22CQ9BRL7 MTDHP2-201ENST00000601468 714 ntBASIC17.04■□□□□ 0.32
SEC22CQ9BRL7 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC17.04■□□□□ 0.32
SEC22CQ9BRL7 AL117332.1-201ENST00000622628 974 ntBASIC17.04■□□□□ 0.32
SEC22CQ9BRL7 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SEC22CQ9BRL7 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SEC22CQ9BRL7 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.04■□□□□ 0.32
SEC22CQ9BRL7 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.04■□□□□ 0.32
SEC22CQ9BRL7 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SEC22CQ9BRL7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SEC22CQ9BRL7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SEC22CQ9BRL7 KRT8P33-201ENST00000508125 1423 ntBASIC17.04■□□□□ 0.32
SEC22CQ9BRL7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SEC22CQ9BRL7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SEC22CQ9BRL7 TMEM179-206ENST00000616017 1645 ntBASIC17.03■□□□□ 0.32
SEC22CQ9BRL7 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.03■□□□□ 0.32
SEC22CQ9BRL7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SEC22CQ9BRL7 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.03■□□□□ 0.32
SEC22CQ9BRL7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SEC22CQ9BRL7 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
SEC22CQ9BRL7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SEC22CQ9BRL7 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SEC22CQ9BRL7 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
SEC22CQ9BRL7 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC17.03■□□□□ 0.32
SEC22CQ9BRL7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC17.03■□□□□ 0.32
SEC22CQ9BRL7 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SEC22CQ9BRL7 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SEC22CQ9BRL7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
SEC22CQ9BRL7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
SEC22CQ9BRL7 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SEC22CQ9BRL7 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SEC22CQ9BRL7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SEC22CQ9BRL7 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SEC22CQ9BRL7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
SEC22CQ9BRL7 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms