Protein–RNA interactions for Protein: Q99959

PKP2, Plakophilin-2, humanhuman

Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2Q99959 AC007613.1-201ENST00000572811 2597 ntBASIC18.99■□□□□ 0.63
PKP2Q99959 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.99■□□□□ 0.63
PKP2Q99959 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PKP2Q99959 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PKP2Q99959 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PKP2Q99959 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PKP2Q99959 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PKP2Q99959 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.99■□□□□ 0.63
PKP2Q99959 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.99■□□□□ 0.63
PKP2Q99959 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PKP2Q99959 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PKP2Q99959 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PKP2Q99959 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
PKP2Q99959 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PKP2Q99959 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PKP2Q99959 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.98■□□□□ 0.63
PKP2Q99959 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PKP2Q99959 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.98■□□□□ 0.63
PKP2Q99959 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PKP2Q99959 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PKP2Q99959 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PKP2Q99959 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PKP2Q99959 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.98■□□□□ 0.63
PKP2Q99959 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.98■□□□□ 0.63
PKP2Q99959 AL356441.2-201ENST00000443009 864 ntBASIC18.98■□□□□ 0.63
PKP2Q99959 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.98■□□□□ 0.63
PKP2Q99959 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PKP2Q99959 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PKP2Q99959 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.98■□□□□ 0.63
PKP2Q99959 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.98■□□□□ 0.63
PKP2Q99959 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PKP2Q99959 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PKP2Q99959 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PKP2Q99959 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
PKP2Q99959 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PKP2Q99959 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PKP2Q99959 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PKP2Q99959 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PKP2Q99959 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PKP2Q99959 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PKP2Q99959 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PKP2Q99959 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.97■□□□□ 0.63
PKP2Q99959 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PKP2Q99959 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PKP2Q99959 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PKP2Q99959 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PKP2Q99959 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PKP2Q99959 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PKP2Q99959 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PKP2Q99959 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.97■□□□□ 0.63
PKP2Q99959 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.97■□□□□ 0.63
PKP2Q99959 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.97■□□□□ 0.63
PKP2Q99959 AL356740.2-201ENST00000601559 647 ntBASIC18.97■□□□□ 0.63
PKP2Q99959 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.97■□□□□ 0.63
PKP2Q99959 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PKP2Q99959 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PKP2Q99959 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.97■□□□□ 0.63
PKP2Q99959 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PKP2Q99959 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.97■□□□□ 0.63
PKP2Q99959 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.96■□□□□ 0.63
PKP2Q99959 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.96■□□□□ 0.63
PKP2Q99959 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PKP2Q99959 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PKP2Q99959 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PKP2Q99959 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.96■□□□□ 0.63
PKP2Q99959 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.96■□□□□ 0.63
PKP2Q99959 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PKP2Q99959 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.96■□□□□ 0.63
PKP2Q99959 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PKP2Q99959 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PKP2Q99959 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.96■□□□□ 0.63
PKP2Q99959 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.96■□□□□ 0.63
PKP2Q99959 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
PKP2Q99959 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PKP2Q99959 AC009237.3-201ENST00000393279 1427 ntBASIC18.96■□□□□ 0.63
PKP2Q99959 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PKP2Q99959 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.96■□□□□ 0.63
PKP2Q99959 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PKP2Q99959 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.96■□□□□ 0.63
PKP2Q99959 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.96■□□□□ 0.63
PKP2Q99959 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PKP2Q99959 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
PKP2Q99959 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PKP2Q99959 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PKP2Q99959 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PKP2Q99959 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.95■□□□□ 0.62
PKP2Q99959 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
PKP2Q99959 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PKP2Q99959 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PKP2Q99959 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PKP2Q99959 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.95■□□□□ 0.62
PKP2Q99959 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.95■□□□□ 0.62
PKP2Q99959 AC092171.4-201ENST00000609130 632 ntBASIC18.95■□□□□ 0.62
PKP2Q99959 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.95■□□□□ 0.62
PKP2Q99959 MIR2861-201ENST00000636310 90 ntBASIC18.95■□□□□ 0.62
PKP2Q99959 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PKP2Q99959 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PKP2Q99959 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
PKP2Q99959 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PKP2Q99959 AP004607.4-201ENST00000530158 1459 ntBASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms