Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DUX3Q96PT4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
DUX3Q96PT4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC15.71■□□□□ 0.11
DUX3Q96PT4 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC15.71■□□□□ 0.11
DUX3Q96PT4 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC15.71■□□□□ 0.11
DUX3Q96PT4 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC15.71■□□□□ 0.11
DUX3Q96PT4 AC098590.1-201ENST00000468126 897 ntBASIC15.71■□□□□ 0.11
DUX3Q96PT4 PNMA6B-201ENST00000538162 1200 ntBASIC15.71■□□□□ 0.11
DUX3Q96PT4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
DUX3Q96PT4 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC15.71■□□□□ 0.11
DUX3Q96PT4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC15.71■□□□□ 0.11
DUX3Q96PT4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
DUX3Q96PT4 HLA-B-256ENST00000639848 1089 ntBASIC15.71■□□□□ 0.11
DUX3Q96PT4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DUX3Q96PT4 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DUX3Q96PT4 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DUX3Q96PT4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DUX3Q96PT4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DUX3Q96PT4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DUX3Q96PT4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.1
DUX3Q96PT4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
DUX3Q96PT4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DUX3Q96PT4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC15.7■□□□□ 0.1
DUX3Q96PT4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
DUX3Q96PT4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DUX3Q96PT4 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DUX3Q96PT4 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC15.7■□□□□ 0.1
DUX3Q96PT4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
DUX3Q96PT4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
DUX3Q96PT4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DUX3Q96PT4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DUX3Q96PT4 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
DUX3Q96PT4 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DUX3Q96PT4 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
DUX3Q96PT4 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
DUX3Q96PT4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DUX3Q96PT4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DUX3Q96PT4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC15.7■□□□□ 0.1
DUX3Q96PT4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DUX3Q96PT4 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DUX3Q96PT4 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DUX3Q96PT4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
DUX3Q96PT4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
DUX3Q96PT4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC15.7■□□□□ 0.1
DUX3Q96PT4 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
DUX3Q96PT4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
DUX3Q96PT4 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DUX3Q96PT4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC15.7■□□□□ 0.1
DUX3Q96PT4 SOX15-203ENST00000570788 1093 ntBASIC15.7■□□□□ 0.1
DUX3Q96PT4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
DUX3Q96PT4 AL356652.1-201ENST00000615962 565 ntBASIC15.7■□□□□ 0.1
DUX3Q96PT4 AC073648.6-201ENST00000641589 218 ntBASIC15.7■□□□□ 0.1
DUX3Q96PT4 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
DUX3Q96PT4 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DUX3Q96PT4 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
DUX3Q96PT4 CRK-204ENST00000574295 1391 ntTSL 5 BASIC15.7■□□□□ 0.1
DUX3Q96PT4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC15.7■□□□□ 0.1
DUX3Q96PT4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
DUX3Q96PT4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DUX3Q96PT4 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
DUX3Q96PT4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC15.7■□□□□ 0.1
DUX3Q96PT4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
DUX3Q96PT4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DUX3Q96PT4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
DUX3Q96PT4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DUX3Q96PT4 FEM1AP4-201ENST00000443167 1987 ntBASIC15.69■□□□□ 0.1
DUX3Q96PT4 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
DUX3Q96PT4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
DUX3Q96PT4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
DUX3Q96PT4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
DUX3Q96PT4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DUX3Q96PT4 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DUX3Q96PT4 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
DUX3Q96PT4 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DUX3Q96PT4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC15.69■□□□□ 0.1
DUX3Q96PT4 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
DUX3Q96PT4 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
DUX3Q96PT4 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
DUX3Q96PT4 AC093827.2-201ENST00000512654 315 ntBASIC15.69■□□□□ 0.1
DUX3Q96PT4 REXO2-208ENST00000539754 791 ntTSL 2 BASIC15.69■□□□□ 0.1
DUX3Q96PT4 C2orf69P4-201ENST00000565394 541 ntBASIC15.69■□□□□ 0.1
DUX3Q96PT4 AC008403.3-201ENST00000598924 454 ntBASIC15.69■□□□□ 0.1
DUX3Q96PT4 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC15.69■□□□□ 0.1
DUX3Q96PT4 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DUX3Q96PT4 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DUX3Q96PT4 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
DUX3Q96PT4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC15.69■□□□□ 0.1
DUX3Q96PT4 AL049796.1-201ENST00000565336 1766 ntBASIC15.69■□□□□ 0.1
DUX3Q96PT4 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DUX3Q96PT4 AC011484.1-201ENST00000377652 1995 ntBASIC15.69■□□□□ 0.1
DUX3Q96PT4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
DUX3Q96PT4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
DUX3Q96PT4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
DUX3Q96PT4 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
DUX3Q96PT4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DUX3Q96PT4 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
DUX3Q96PT4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC15.68■□□□□ 0.1
DUX3Q96PT4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
DUX3Q96PT4 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
DUX3Q96PT4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms