Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
COL21A1Q96P44 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.06■□□□□ 0.64
COL21A1Q96P44 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.06■□□□□ 0.64
COL21A1Q96P44 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL21A1Q96P44 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
COL21A1Q96P44 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL21A1Q96P44 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.06■□□□□ 0.64
COL21A1Q96P44 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL21A1Q96P44 CDCA4P2-201ENST00000441182 718 ntBASIC19.06■□□□□ 0.64
COL21A1Q96P44 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.06■□□□□ 0.64
COL21A1Q96P44 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL21A1Q96P44 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.06■□□□□ 0.64
COL21A1Q96P44 AL591742.1-201ENST00000604433 565 ntBASIC19.06■□□□□ 0.64
COL21A1Q96P44 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
COL21A1Q96P44 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.06■□□□□ 0.64
COL21A1Q96P44 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL21A1Q96P44 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
COL21A1Q96P44 AL512408.1-201ENST00000569378 2000 ntBASIC19.06■□□□□ 0.64
COL21A1Q96P44 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL21A1Q96P44 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.06■□□□□ 0.64
COL21A1Q96P44 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL21A1Q96P44 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL21A1Q96P44 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.06■□□□□ 0.64
COL21A1Q96P44 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL21A1Q96P44 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL21A1Q96P44 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
COL21A1Q96P44 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL21A1Q96P44 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL21A1Q96P44 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL21A1Q96P44 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
COL21A1Q96P44 AC026185.1-201ENST00000445748 174 ntBASIC19.05■□□□□ 0.64
COL21A1Q96P44 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL21A1Q96P44 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.05■□□□□ 0.64
COL21A1Q96P44 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.05■□□□□ 0.64
COL21A1Q96P44 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL21A1Q96P44 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.05■□□□□ 0.64
COL21A1Q96P44 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL21A1Q96P44 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL21A1Q96P44 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
COL21A1Q96P44 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
COL21A1Q96P44 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL21A1Q96P44 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL21A1Q96P44 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL21A1Q96P44 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL21A1Q96P44 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
COL21A1Q96P44 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL21A1Q96P44 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
COL21A1Q96P44 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL21A1Q96P44 CDV3P1-201ENST00000471403 739 ntBASIC19.04■□□□□ 0.64
COL21A1Q96P44 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.04■□□□□ 0.64
COL21A1Q96P44 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
COL21A1Q96P44 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL21A1Q96P44 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.04■□□□□ 0.64
COL21A1Q96P44 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL21A1Q96P44 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.04■□□□□ 0.64
COL21A1Q96P44 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL21A1Q96P44 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL21A1Q96P44 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
COL21A1Q96P44 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL21A1Q96P44 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL21A1Q96P44 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.03■□□□□ 0.64
COL21A1Q96P44 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL21A1Q96P44 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.03■□□□□ 0.64
COL21A1Q96P44 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL21A1Q96P44 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL21A1Q96P44 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
COL21A1Q96P44 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL21A1Q96P44 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
COL21A1Q96P44 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.03■□□□□ 0.64
COL21A1Q96P44 AL162412.1-201ENST00000567129 965 ntBASIC19.03■□□□□ 0.64
COL21A1Q96P44 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.03■□□□□ 0.64
COL21A1Q96P44 RAP2CP1-201ENST00000605103 478 ntBASIC19.03■□□□□ 0.64
COL21A1Q96P44 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.03■□□□□ 0.64
COL21A1Q96P44 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL21A1Q96P44 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.03■□□□□ 0.64
COL21A1Q96P44 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.03■□□□□ 0.64
COL21A1Q96P44 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL21A1Q96P44 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL21A1Q96P44 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
COL21A1Q96P44 AC116050.2-201ENST00000612102 1779 ntBASIC19.03■□□□□ 0.64
COL21A1Q96P44 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.03■□□□□ 0.64
COL21A1Q96P44 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL21A1Q96P44 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.03■□□□□ 0.64
COL21A1Q96P44 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL21A1Q96P44 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL21A1Q96P44 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.02■□□□□ 0.64
COL21A1Q96P44 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.02■□□□□ 0.64
COL21A1Q96P44 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL21A1Q96P44 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
COL21A1Q96P44 AC068338.2-201ENST00000563278 1430 ntBASIC19.02■□□□□ 0.64
COL21A1Q96P44 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.02■□□□□ 0.64
COL21A1Q96P44 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.02■□□□□ 0.64
COL21A1Q96P44 AL162377.1-201ENST00000618844 1793 ntBASIC19.02■□□□□ 0.64
COL21A1Q96P44 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL21A1Q96P44 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL21A1Q96P44 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.02■□□□□ 0.64
COL21A1Q96P44 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
COL21A1Q96P44 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.02■□□□□ 0.64
COL21A1Q96P44 AC007322.3-201ENST00000426526 701 ntBASIC19.02■□□□□ 0.64
COL21A1Q96P44 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms