Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TIMD4Q96H15 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TIMD4Q96H15 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17■□□□□ 0.31
TIMD4Q96H15 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC17■□□□□ 0.31
TIMD4Q96H15 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.99■□□□□ 0.31
TIMD4Q96H15 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TIMD4Q96H15 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TIMD4Q96H15 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TIMD4Q96H15 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TIMD4Q96H15 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TIMD4Q96H15 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TIMD4Q96H15 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TIMD4Q96H15 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TIMD4Q96H15 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TIMD4Q96H15 AC128676.1-201ENST00000454392 318 ntBASIC16.99■□□□□ 0.31
TIMD4Q96H15 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TIMD4Q96H15 LINC00565-201ENST00000562710 2331 ntBASIC16.99■□□□□ 0.31
TIMD4Q96H15 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TIMD4Q96H15 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TIMD4Q96H15 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TIMD4Q96H15 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TIMD4Q96H15 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
TIMD4Q96H15 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TIMD4Q96H15 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TIMD4Q96H15 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TIMD4Q96H15 KRT8P36-201ENST00000489121 1440 ntBASIC16.98■□□□□ 0.31
TIMD4Q96H15 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TIMD4Q96H15 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
TIMD4Q96H15 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TIMD4Q96H15 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TIMD4Q96H15 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TIMD4Q96H15 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TIMD4Q96H15 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TIMD4Q96H15 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.98■□□□□ 0.31
TIMD4Q96H15 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC16.98■□□□□ 0.31
TIMD4Q96H15 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
TIMD4Q96H15 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TIMD4Q96H15 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TIMD4Q96H15 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TIMD4Q96H15 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TIMD4Q96H15 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TIMD4Q96H15 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TIMD4Q96H15 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TIMD4Q96H15 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TIMD4Q96H15 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TIMD4Q96H15 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TIMD4Q96H15 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TIMD4Q96H15 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TIMD4Q96H15 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TIMD4Q96H15 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.97■□□□□ 0.31
TIMD4Q96H15 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TIMD4Q96H15 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.97■□□□□ 0.31
TIMD4Q96H15 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TIMD4Q96H15 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TIMD4Q96H15 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
TIMD4Q96H15 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TIMD4Q96H15 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC16.97■□□□□ 0.31
TIMD4Q96H15 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TIMD4Q96H15 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TIMD4Q96H15 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.96■□□□□ 0.31
TIMD4Q96H15 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TIMD4Q96H15 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TIMD4Q96H15 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
TIMD4Q96H15 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TIMD4Q96H15 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TIMD4Q96H15 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TIMD4Q96H15 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.96■□□□□ 0.31
TIMD4Q96H15 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TIMD4Q96H15 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.96■□□□□ 0.31
TIMD4Q96H15 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TIMD4Q96H15 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.96■□□□□ 0.31
TIMD4Q96H15 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.96■□□□□ 0.31
TIMD4Q96H15 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.96■□□□□ 0.31
TIMD4Q96H15 AC005829.2-201ENST00000571422 1056 ntBASIC16.96■□□□□ 0.31
TIMD4Q96H15 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.96■□□□□ 0.31
TIMD4Q96H15 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TIMD4Q96H15 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TIMD4Q96H15 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TIMD4Q96H15 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TIMD4Q96H15 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TIMD4Q96H15 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TIMD4Q96H15 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TIMD4Q96H15 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.96■□□□□ 0.3
TIMD4Q96H15 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
TIMD4Q96H15 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TIMD4Q96H15 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC16.95■□□□□ 0.3
TIMD4Q96H15 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TIMD4Q96H15 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TIMD4Q96H15 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TIMD4Q96H15 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TIMD4Q96H15 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TIMD4Q96H15 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.95■□□□□ 0.3
TIMD4Q96H15 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TIMD4Q96H15 PRORSD1P-201ENST00000295112 541 ntBASIC16.95■□□□□ 0.3
TIMD4Q96H15 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TIMD4Q96H15 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TIMD4Q96H15 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TIMD4Q96H15 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.95■□□□□ 0.3
TIMD4Q96H15 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.95■□□□□ 0.3
TIMD4Q96H15 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms