Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
DDX11Q96FC9 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC23.96■■□□□ 1.43
DDX11Q96FC9 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
DDX11Q96FC9 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC23.96■■□□□ 1.43
DDX11Q96FC9 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
DDX11Q96FC9 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
DDX11Q96FC9 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
DDX11Q96FC9 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
DDX11Q96FC9 PTPA-214ENST00000423100 988 ntTSL 2 BASIC23.96■■□□□ 1.43
DDX11Q96FC9 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC23.96■■□□□ 1.43
DDX11Q96FC9 CD44-222ENST00000526025 1052 ntTSL 2 BASIC23.96■■□□□ 1.43
DDX11Q96FC9 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC23.96■■□□□ 1.43
DDX11Q96FC9 AC008687.6-201ENST00000596318 630 ntBASIC23.96■■□□□ 1.43
DDX11Q96FC9 MYC-209ENST00000641252 345 ntBASIC23.96■■□□□ 1.43
DDX11Q96FC9 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
DDX11Q96FC9 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
DDX11Q96FC9 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
DDX11Q96FC9 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC23.96■■□□□ 1.43
DDX11Q96FC9 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC23.96■■□□□ 1.43
DDX11Q96FC9 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC23.96■■□□□ 1.43
DDX11Q96FC9 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
DDX11Q96FC9 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
DDX11Q96FC9 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
DDX11Q96FC9 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
DDX11Q96FC9 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.43
DDX11Q96FC9 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
DDX11Q96FC9 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
DDX11Q96FC9 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC23.95■■□□□ 1.42
DDX11Q96FC9 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
DDX11Q96FC9 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
DDX11Q96FC9 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
DDX11Q96FC9 AC091874.3-201ENST00000512672 1195 ntBASIC23.95■■□□□ 1.42
DDX11Q96FC9 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC23.95■■□□□ 1.42
DDX11Q96FC9 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
DDX11Q96FC9 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
DDX11Q96FC9 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC23.95■■□□□ 1.42
DDX11Q96FC9 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.42
DDX11Q96FC9 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
DDX11Q96FC9 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC23.94■■□□□ 1.42
DDX11Q96FC9 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
DDX11Q96FC9 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC23.94■■□□□ 1.42
DDX11Q96FC9 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
DDX11Q96FC9 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
DDX11Q96FC9 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC23.94■■□□□ 1.42
DDX11Q96FC9 DUSP5P2-201ENST00000426873 1033 ntBASIC23.94■■□□□ 1.42
DDX11Q96FC9 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
DDX11Q96FC9 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC23.94■■□□□ 1.42
DDX11Q96FC9 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
DDX11Q96FC9 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC23.94■■□□□ 1.42
DDX11Q96FC9 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC23.94■■□□□ 1.42
DDX11Q96FC9 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
DDX11Q96FC9 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC23.94■■□□□ 1.42
DDX11Q96FC9 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
DDX11Q96FC9 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
DDX11Q96FC9 AC116050.2-201ENST00000612102 1779 ntBASIC23.93■■□□□ 1.42
DDX11Q96FC9 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC23.93■■□□□ 1.42
DDX11Q96FC9 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC23.93■■□□□ 1.42
DDX11Q96FC9 AC020907.5-201ENST00000624372 1936 ntBASIC23.93■■□□□ 1.42
DDX11Q96FC9 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
DDX11Q96FC9 AC091799.1-201ENST00000422823 811 ntBASIC23.93■■□□□ 1.42
DDX11Q96FC9 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC23.93■■□□□ 1.42
DDX11Q96FC9 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC23.93■■□□□ 1.42
DDX11Q96FC9 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
DDX11Q96FC9 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC23.93■■□□□ 1.42
DDX11Q96FC9 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
DDX11Q96FC9 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
DDX11Q96FC9 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
DDX11Q96FC9 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC23.93■■□□□ 1.42
DDX11Q96FC9 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
DDX11Q96FC9 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
DDX11Q96FC9 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
DDX11Q96FC9 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
DDX11Q96FC9 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
DDX11Q96FC9 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC23.92■■□□□ 1.42
DDX11Q96FC9 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
DDX11Q96FC9 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
DDX11Q96FC9 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
DDX11Q96FC9 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
DDX11Q96FC9 SERPINH1P1-201ENST00000419794 1249 ntBASIC23.92■■□□□ 1.42
DDX11Q96FC9 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC23.92■■□□□ 1.42
DDX11Q96FC9 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC23.92■■□□□ 1.42
DDX11Q96FC9 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC23.92■■□□□ 1.42
DDX11Q96FC9 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
DDX11Q96FC9 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC23.92■■□□□ 1.42
DDX11Q96FC9 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
DDX11Q96FC9 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC23.92■■□□□ 1.42
DDX11Q96FC9 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC23.91■■□□□ 1.42
DDX11Q96FC9 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
DDX11Q96FC9 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
DDX11Q96FC9 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
DDX11Q96FC9 LSM12P1-201ENST00000411836 588 ntBASIC23.91■■□□□ 1.42
DDX11Q96FC9 OR2A1-AS1-201ENST00000462305 773 ntBASIC23.91■■□□□ 1.42
DDX11Q96FC9 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC23.91■■□□□ 1.42
DDX11Q96FC9 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
DDX11Q96FC9 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC23.91■■□□□ 1.42
DDX11Q96FC9 DET1-207ENST00000564406 2315 ntTSL 2 BASIC23.91■■□□□ 1.42
DDX11Q96FC9 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC23.91■■□□□ 1.42
DDX11Q96FC9 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
DDX11Q96FC9 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
DDX11Q96FC9 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms