Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RAB40AQ8WXH6 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.72■□□□□ 0.43
RAB40AQ8WXH6 AC092720.2-201ENST00000602388 1665 ntBASIC17.72■□□□□ 0.43
RAB40AQ8WXH6 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.72■□□□□ 0.43
RAB40AQ8WXH6 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAB40AQ8WXH6 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAB40AQ8WXH6 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
RAB40AQ8WXH6 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.72■□□□□ 0.43
RAB40AQ8WXH6 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.72■□□□□ 0.43
RAB40AQ8WXH6 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB40AQ8WXH6 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB40AQ8WXH6 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB40AQ8WXH6 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.71■□□□□ 0.43
RAB40AQ8WXH6 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB40AQ8WXH6 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
RAB40AQ8WXH6 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.71■□□□□ 0.43
RAB40AQ8WXH6 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB40AQ8WXH6 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB40AQ8WXH6 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.71■□□□□ 0.43
RAB40AQ8WXH6 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB40AQ8WXH6 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB40AQ8WXH6 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
RAB40AQ8WXH6 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.71■□□□□ 0.43
RAB40AQ8WXH6 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.71■□□□□ 0.43
RAB40AQ8WXH6 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB40AQ8WXH6 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.71■□□□□ 0.43
RAB40AQ8WXH6 AC092437.1-201ENST00000624794 1048 ntBASIC17.71■□□□□ 0.43
RAB40AQ8WXH6 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.71■□□□□ 0.43
RAB40AQ8WXH6 AC116562.4-201ENST00000641316 2276 ntBASIC17.71■□□□□ 0.43
RAB40AQ8WXH6 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB40AQ8WXH6 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB40AQ8WXH6 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
RAB40AQ8WXH6 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
RAB40AQ8WXH6 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.71■□□□□ 0.43
RAB40AQ8WXH6 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB40AQ8WXH6 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.71■□□□□ 0.43
RAB40AQ8WXH6 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
RAB40AQ8WXH6 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB40AQ8WXH6 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RAB40AQ8WXH6 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.71■□□□□ 0.42
RAB40AQ8WXH6 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.42
RAB40AQ8WXH6 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
RAB40AQ8WXH6 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
RAB40AQ8WXH6 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB40AQ8WXH6 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.7■□□□□ 0.42
RAB40AQ8WXH6 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAB40AQ8WXH6 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB40AQ8WXH6 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.7■□□□□ 0.42
RAB40AQ8WXH6 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB40AQ8WXH6 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB40AQ8WXH6 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.7■□□□□ 0.42
RAB40AQ8WXH6 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAB40AQ8WXH6 AC004911.1-201ENST00000416316 871 ntBASIC17.7■□□□□ 0.42
RAB40AQ8WXH6 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.7■□□□□ 0.42
RAB40AQ8WXH6 AC137761.2-201ENST00000561729 223 ntBASIC17.7■□□□□ 0.42
RAB40AQ8WXH6 AC145350.3-201ENST00000569033 163 ntBASIC17.7■□□□□ 0.42
RAB40AQ8WXH6 KRT18P61-201ENST00000585825 1298 ntBASIC17.7■□□□□ 0.42
RAB40AQ8WXH6 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAB40AQ8WXH6 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
RAB40AQ8WXH6 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RAB40AQ8WXH6 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB40AQ8WXH6 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAB40AQ8WXH6 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.7■□□□□ 0.42
RAB40AQ8WXH6 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAB40AQ8WXH6 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
RAB40AQ8WXH6 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.7■□□□□ 0.42
RAB40AQ8WXH6 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB40AQ8WXH6 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.69■□□□□ 0.42
RAB40AQ8WXH6 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAB40AQ8WXH6 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.69■□□□□ 0.42
RAB40AQ8WXH6 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
RAB40AQ8WXH6 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB40AQ8WXH6 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB40AQ8WXH6 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.69■□□□□ 0.42
RAB40AQ8WXH6 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAB40AQ8WXH6 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.69■□□□□ 0.42
RAB40AQ8WXH6 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.69■□□□□ 0.42
RAB40AQ8WXH6 AC016769.1-201ENST00000409132 1010 ntBASIC17.69■□□□□ 0.42
RAB40AQ8WXH6 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.69■□□□□ 0.42
RAB40AQ8WXH6 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.69■□□□□ 0.42
RAB40AQ8WXH6 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.69■□□□□ 0.42
RAB40AQ8WXH6 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.69■□□□□ 0.42
RAB40AQ8WXH6 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.69■□□□□ 0.42
RAB40AQ8WXH6 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB40AQ8WXH6 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB40AQ8WXH6 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.69■□□□□ 0.42
RAB40AQ8WXH6 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB40AQ8WXH6 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB40AQ8WXH6 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
RAB40AQ8WXH6 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB40AQ8WXH6 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB40AQ8WXH6 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB40AQ8WXH6 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB40AQ8WXH6 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB40AQ8WXH6 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RAB40AQ8WXH6 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RAB40AQ8WXH6 AC055733.4-201ENST00000638462 1354 ntBASIC17.68■□□□□ 0.42
RAB40AQ8WXH6 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB40AQ8WXH6 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RAB40AQ8WXH6 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms