Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHD6Q8TD26 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.46■□□□□ 0.55
CHD6Q8TD26 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHD6Q8TD26 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CHD6Q8TD26 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
CHD6Q8TD26 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.54
CHD6Q8TD26 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHD6Q8TD26 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CHD6Q8TD26 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.45■□□□□ 0.54
CHD6Q8TD26 AL732292.2-201ENST00000609649 430 ntBASIC18.45■□□□□ 0.54
CHD6Q8TD26 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CHD6Q8TD26 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CHD6Q8TD26 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHD6Q8TD26 AC007322.3-201ENST00000426526 701 ntBASIC18.45■□□□□ 0.54
CHD6Q8TD26 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.45■□□□□ 0.54
CHD6Q8TD26 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.45■□□□□ 0.54
CHD6Q8TD26 AC140113.2-201ENST00000604370 208 ntBASIC18.45■□□□□ 0.54
CHD6Q8TD26 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.45■□□□□ 0.54
CHD6Q8TD26 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHD6Q8TD26 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHD6Q8TD26 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHD6Q8TD26 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CHD6Q8TD26 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHD6Q8TD26 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHD6Q8TD26 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHD6Q8TD26 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.44■□□□□ 0.54
CHD6Q8TD26 AC079089.2-201ENST00000531211 1277 ntBASIC18.44■□□□□ 0.54
CHD6Q8TD26 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.44■□□□□ 0.54
CHD6Q8TD26 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHD6Q8TD26 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHD6Q8TD26 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHD6Q8TD26 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.44■□□□□ 0.54
CHD6Q8TD26 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.44■□□□□ 0.54
CHD6Q8TD26 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
CHD6Q8TD26 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHD6Q8TD26 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHD6Q8TD26 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CHD6Q8TD26 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
CHD6Q8TD26 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.44■□□□□ 0.54
CHD6Q8TD26 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHD6Q8TD26 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHD6Q8TD26 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHD6Q8TD26 MIR564-202ENST00000385049 94 ntBASIC18.43■□□□□ 0.54
CHD6Q8TD26 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.43■□□□□ 0.54
CHD6Q8TD26 CYP21A1P-202ENST00000354927 1481 ntBASIC18.43■□□□□ 0.54
CHD6Q8TD26 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHD6Q8TD26 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHD6Q8TD26 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHD6Q8TD26 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHD6Q8TD26 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHD6Q8TD26 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHD6Q8TD26 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHD6Q8TD26 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.43■□□□□ 0.54
CHD6Q8TD26 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CHD6Q8TD26 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHD6Q8TD26 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHD6Q8TD26 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHD6Q8TD26 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHD6Q8TD26 AC097488.1-201ENST00000507834 756 ntBASIC18.43■□□□□ 0.54
CHD6Q8TD26 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.43■□□□□ 0.54
CHD6Q8TD26 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.43■□□□□ 0.54
CHD6Q8TD26 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.43■□□□□ 0.54
CHD6Q8TD26 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.42■□□□□ 0.54
CHD6Q8TD26 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHD6Q8TD26 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CHD6Q8TD26 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.42■□□□□ 0.54
CHD6Q8TD26 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.42■□□□□ 0.54
CHD6Q8TD26 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHD6Q8TD26 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHD6Q8TD26 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHD6Q8TD26 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHD6Q8TD26 AC244107.1-201ENST00000442033 332 ntBASIC18.42■□□□□ 0.54
CHD6Q8TD26 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CHD6Q8TD26 HLA-J-203ENST00000494367 1087 ntBASIC18.42■□□□□ 0.54
CHD6Q8TD26 RNA5SP419-201ENST00000515908 135 ntBASIC18.42■□□□□ 0.54
CHD6Q8TD26 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHD6Q8TD26 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CHD6Q8TD26 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
CHD6Q8TD26 FSCN1P1-201ENST00000568912 1481 ntBASIC18.41■□□□□ 0.54
CHD6Q8TD26 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHD6Q8TD26 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHD6Q8TD26 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHD6Q8TD26 AC022211.4-201ENST00000625094 2161 ntBASIC18.41■□□□□ 0.54
CHD6Q8TD26 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHD6Q8TD26 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CHD6Q8TD26 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHD6Q8TD26 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHD6Q8TD26 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHD6Q8TD26 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHD6Q8TD26 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHD6Q8TD26 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHD6Q8TD26 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHD6Q8TD26 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.41■□□□□ 0.54
CHD6Q8TD26 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHD6Q8TD26 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHD6Q8TD26 AL445675.2-201ENST00000620291 557 ntBASIC18.41■□□□□ 0.54
CHD6Q8TD26 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHD6Q8TD26 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.4■□□□□ 0.54
CHD6Q8TD26 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.4■□□□□ 0.54
CHD6Q8TD26 AC079776.4-201ENST00000511039 504 ntBASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms