Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC197Q8NCU1 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC197Q8NCU1 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC197Q8NCU1 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC197Q8NCU1 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
CCDC197Q8NCU1 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC197Q8NCU1 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC197Q8NCU1 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC197Q8NCU1 AL049812.1-201ENST00000432563 2267 ntBASIC20.05■□□□□ 0.8
CCDC197Q8NCU1 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC197Q8NCU1 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CCDC197Q8NCU1 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CCDC197Q8NCU1 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC197Q8NCU1 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC197Q8NCU1 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC197Q8NCU1 AC004987.1-201ENST00000428627 508 ntBASIC20.05■□□□□ 0.8
CCDC197Q8NCU1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.05■□□□□ 0.8
CCDC197Q8NCU1 AC092028.1-203ENST00000608262 953 ntBASIC20.05■□□□□ 0.8
CCDC197Q8NCU1 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC197Q8NCU1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC197Q8NCU1 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.05■□□□□ 0.8
CCDC197Q8NCU1 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC197Q8NCU1 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC197Q8NCU1 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC197Q8NCU1 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CCDC197Q8NCU1 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CCDC197Q8NCU1 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC197Q8NCU1 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC197Q8NCU1 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC197Q8NCU1 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC197Q8NCU1 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC197Q8NCU1 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC197Q8NCU1 BX664725.1-201ENST00000438252 379 ntBASIC20.04■□□□□ 0.8
CCDC197Q8NCU1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC197Q8NCU1 AC010525.1-201ENST00000585559 441 ntBASIC20.04■□□□□ 0.8
CCDC197Q8NCU1 AC005332.8-201ENST00000622750 2735 ntBASIC20.04■□□□□ 0.8
CCDC197Q8NCU1 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC197Q8NCU1 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC197Q8NCU1 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CCDC197Q8NCU1 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC197Q8NCU1 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC197Q8NCU1 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC197Q8NCU1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CCDC197Q8NCU1 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC197Q8NCU1 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CCDC197Q8NCU1 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC197Q8NCU1 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC197Q8NCU1 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC197Q8NCU1 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC197Q8NCU1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC197Q8NCU1 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC197Q8NCU1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC197Q8NCU1 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC197Q8NCU1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CCDC197Q8NCU1 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CCDC197Q8NCU1 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
CCDC197Q8NCU1 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC197Q8NCU1 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC197Q8NCU1 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC197Q8NCU1 AL691432.2-201ENST00000607222 2038 ntBASIC20.03■□□□□ 0.8
CCDC197Q8NCU1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CCDC197Q8NCU1 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC197Q8NCU1 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC197Q8NCU1 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC197Q8NCU1 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC197Q8NCU1 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CCDC197Q8NCU1 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CCDC197Q8NCU1 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC197Q8NCU1 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC197Q8NCU1 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC197Q8NCU1 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC197Q8NCU1 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC197Q8NCU1 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CCDC197Q8NCU1 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.02■□□□□ 0.8
CCDC197Q8NCU1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CCDC197Q8NCU1 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.02■□□□□ 0.8
CCDC197Q8NCU1 AC055733.4-201ENST00000638462 1354 ntBASIC20.02■□□□□ 0.8
CCDC197Q8NCU1 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC197Q8NCU1 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC197Q8NCU1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC197Q8NCU1 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
CCDC197Q8NCU1 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
CCDC197Q8NCU1 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.79
CCDC197Q8NCU1 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.02■□□□□ 0.79
CCDC197Q8NCU1 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
CCDC197Q8NCU1 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CCDC197Q8NCU1 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC197Q8NCU1 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC197Q8NCU1 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC197Q8NCU1 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC197Q8NCU1 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC197Q8NCU1 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.01■□□□□ 0.79
CCDC197Q8NCU1 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC197Q8NCU1 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC197Q8NCU1 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC197Q8NCU1 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
CCDC197Q8NCU1 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC197Q8NCU1 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC197Q8NCU1 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC197Q8NCU1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms