Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.64■□□□□ 0.89
PCDH20Q8N6Y1 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.64■□□□□ 0.89
PCDH20Q8N6Y1 HLA-B-256ENST00000639848 1089 ntBASIC20.64■□□□□ 0.89
PCDH20Q8N6Y1 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH20Q8N6Y1 PLK5-205ENST00000642079 1969 ntBASIC20.64■□□□□ 0.89
PCDH20Q8N6Y1 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH20Q8N6Y1 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH20Q8N6Y1 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH20Q8N6Y1 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH20Q8N6Y1 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH20Q8N6Y1 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PCDH20Q8N6Y1 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDH20Q8N6Y1 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH20Q8N6Y1 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH20Q8N6Y1 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDH20Q8N6Y1 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.63■□□□□ 0.89
PCDH20Q8N6Y1 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.63■□□□□ 0.89
PCDH20Q8N6Y1 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.63■□□□□ 0.89
PCDH20Q8N6Y1 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDH20Q8N6Y1 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH20Q8N6Y1 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH20Q8N6Y1 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH20Q8N6Y1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PCDH20Q8N6Y1 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PCDH20Q8N6Y1 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH20Q8N6Y1 KRT8P36-201ENST00000489121 1440 ntBASIC20.62■□□□□ 0.89
PCDH20Q8N6Y1 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH20Q8N6Y1 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDH20Q8N6Y1 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDH20Q8N6Y1 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH20Q8N6Y1 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH20Q8N6Y1 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH20Q8N6Y1 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH20Q8N6Y1 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDH20Q8N6Y1 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH20Q8N6Y1 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH20Q8N6Y1 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH20Q8N6Y1 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDH20Q8N6Y1 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PCDH20Q8N6Y1 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.62■□□□□ 0.89
PCDH20Q8N6Y1 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDH20Q8N6Y1 AC060766.5-201ENST00000590539 871 ntBASIC20.62■□□□□ 0.89
PCDH20Q8N6Y1 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.62■□□□□ 0.89
PCDH20Q8N6Y1 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
PCDH20Q8N6Y1 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH20Q8N6Y1 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDH20Q8N6Y1 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH20Q8N6Y1 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.61■□□□□ 0.89
PCDH20Q8N6Y1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH20Q8N6Y1 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
PCDH20Q8N6Y1 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.61■□□□□ 0.89
PCDH20Q8N6Y1 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH20Q8N6Y1 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH20Q8N6Y1 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH20Q8N6Y1 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH20Q8N6Y1 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH20Q8N6Y1 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH20Q8N6Y1 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH20Q8N6Y1 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDH20Q8N6Y1 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.61■□□□□ 0.89
PCDH20Q8N6Y1 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
PCDH20Q8N6Y1 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.61■□□□□ 0.89
PCDH20Q8N6Y1 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.61■□□□□ 0.89
PCDH20Q8N6Y1 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PCDH20Q8N6Y1 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDH20Q8N6Y1 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDH20Q8N6Y1 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH20Q8N6Y1 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH20Q8N6Y1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH20Q8N6Y1 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.6■□□□□ 0.89
PCDH20Q8N6Y1 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH20Q8N6Y1 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH20Q8N6Y1 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
PCDH20Q8N6Y1 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH20Q8N6Y1 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
PCDH20Q8N6Y1 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.6■□□□□ 0.89
PCDH20Q8N6Y1 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.6■□□□□ 0.89
PCDH20Q8N6Y1 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH20Q8N6Y1 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH20Q8N6Y1 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH20Q8N6Y1 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH20Q8N6Y1 ABHD17AP1-201ENST00000358206 933 ntBASIC20.6■□□□□ 0.89
PCDH20Q8N6Y1 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.6■□□□□ 0.89
PCDH20Q8N6Y1 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
PCDH20Q8N6Y1 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH20Q8N6Y1 MIR4651-201ENST00000582622 73 ntBASIC20.6■□□□□ 0.89
PCDH20Q8N6Y1 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH20Q8N6Y1 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH20Q8N6Y1 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.6■□□□□ 0.89
PCDH20Q8N6Y1 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH20Q8N6Y1 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH20Q8N6Y1 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH20Q8N6Y1 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH20Q8N6Y1 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH20Q8N6Y1 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.6■□□□□ 0.89
PCDH20Q8N6Y1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH20Q8N6Y1 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDH20Q8N6Y1 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PCDH20Q8N6Y1 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PCDH20Q8N6Y1 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms