Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CLIP4Q8N3C7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLIP4Q8N3C7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CLIP4Q8N3C7 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CLIP4Q8N3C7 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLIP4Q8N3C7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLIP4Q8N3C7 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CLIP4Q8N3C7 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLIP4Q8N3C7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.88■□□□□ 0.61
CLIP4Q8N3C7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLIP4Q8N3C7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.88■□□□□ 0.61
CLIP4Q8N3C7 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.87■□□□□ 0.61
CLIP4Q8N3C7 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CLIP4Q8N3C7 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLIP4Q8N3C7 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLIP4Q8N3C7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLIP4Q8N3C7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.87■□□□□ 0.61
CLIP4Q8N3C7 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLIP4Q8N3C7 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLIP4Q8N3C7 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLIP4Q8N3C7 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CLIP4Q8N3C7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.87■□□□□ 0.61
CLIP4Q8N3C7 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLIP4Q8N3C7 AC091799.1-201ENST00000422823 811 ntBASIC18.87■□□□□ 0.61
CLIP4Q8N3C7 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLIP4Q8N3C7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLIP4Q8N3C7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.87■□□□□ 0.61
CLIP4Q8N3C7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.87■□□□□ 0.61
CLIP4Q8N3C7 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.87■□□□□ 0.61
CLIP4Q8N3C7 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CLIP4Q8N3C7 AL162377.1-201ENST00000618844 1793 ntBASIC18.87■□□□□ 0.61
CLIP4Q8N3C7 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.87■□□□□ 0.61
CLIP4Q8N3C7 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.87■□□□□ 0.61
CLIP4Q8N3C7 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLIP4Q8N3C7 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.87■□□□□ 0.61
CLIP4Q8N3C7 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.86■□□□□ 0.61
CLIP4Q8N3C7 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.86■□□□□ 0.61
CLIP4Q8N3C7 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLIP4Q8N3C7 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLIP4Q8N3C7 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CLIP4Q8N3C7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLIP4Q8N3C7 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLIP4Q8N3C7 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CLIP4Q8N3C7 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
CLIP4Q8N3C7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLIP4Q8N3C7 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CLIP4Q8N3C7 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.86■□□□□ 0.61
CLIP4Q8N3C7 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLIP4Q8N3C7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLIP4Q8N3C7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.86■□□□□ 0.61
CLIP4Q8N3C7 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.86■□□□□ 0.61
CLIP4Q8N3C7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.86■□□□□ 0.61
CLIP4Q8N3C7 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CLIP4Q8N3C7 AC243732.1-201ENST00000612648 864 ntBASIC18.86■□□□□ 0.61
CLIP4Q8N3C7 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLIP4Q8N3C7 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLIP4Q8N3C7 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CLIP4Q8N3C7 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLIP4Q8N3C7 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.86■□□□□ 0.61
CLIP4Q8N3C7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CLIP4Q8N3C7 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.86■□□□□ 0.61
CLIP4Q8N3C7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
CLIP4Q8N3C7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CLIP4Q8N3C7 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.85■□□□□ 0.61
CLIP4Q8N3C7 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CLIP4Q8N3C7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLIP4Q8N3C7 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.85■□□□□ 0.61
CLIP4Q8N3C7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.85■□□□□ 0.61
CLIP4Q8N3C7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLIP4Q8N3C7 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLIP4Q8N3C7 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLIP4Q8N3C7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLIP4Q8N3C7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CLIP4Q8N3C7 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLIP4Q8N3C7 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLIP4Q8N3C7 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLIP4Q8N3C7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CLIP4Q8N3C7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CLIP4Q8N3C7 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLIP4Q8N3C7 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
CLIP4Q8N3C7 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CLIP4Q8N3C7 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.85■□□□□ 0.61
CLIP4Q8N3C7 NTF6G-201ENST00000591094 616 ntBASIC18.85■□□□□ 0.61
CLIP4Q8N3C7 UBE2DNL-204ENST00000602536 740 ntBASIC18.85■□□□□ 0.61
CLIP4Q8N3C7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.85■□□□□ 0.61
CLIP4Q8N3C7 MIR2861-201ENST00000636310 90 ntBASIC18.85■□□□□ 0.61
CLIP4Q8N3C7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLIP4Q8N3C7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLIP4Q8N3C7 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.85■□□□□ 0.61
CLIP4Q8N3C7 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CLIP4Q8N3C7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLIP4Q8N3C7 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLIP4Q8N3C7 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CLIP4Q8N3C7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CLIP4Q8N3C7 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.84■□□□□ 0.61
CLIP4Q8N3C7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLIP4Q8N3C7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLIP4Q8N3C7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLIP4Q8N3C7 AC097381.1-201ENST00000429019 1296 ntBASIC18.84■□□□□ 0.61
CLIP4Q8N3C7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms