Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC25.09■■□□□ 1.61
SMC5Q8IY18 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SMC5Q8IY18 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SMC5Q8IY18 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SMC5Q8IY18 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SMC5Q8IY18 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
SMC5Q8IY18 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
SMC5Q8IY18 AC016769.1-201ENST00000409132 1010 ntBASIC25.08■■□□□ 1.61
SMC5Q8IY18 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC25.08■■□□□ 1.61
SMC5Q8IY18 ANKRD20A6P-201ENST00000618763 204 ntBASIC25.08■■□□□ 1.61
SMC5Q8IY18 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SMC5Q8IY18 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
SMC5Q8IY18 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.6
SMC5Q8IY18 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.6
SMC5Q8IY18 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
SMC5Q8IY18 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SMC5Q8IY18 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
SMC5Q8IY18 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SMC5Q8IY18 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC25.07■■□□□ 1.6
SMC5Q8IY18 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
SMC5Q8IY18 MCRIP2P1-201ENST00000394346 511 ntBASIC25.07■■□□□ 1.6
SMC5Q8IY18 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC25.07■■□□□ 1.6
SMC5Q8IY18 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SMC5Q8IY18 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
SMC5Q8IY18 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC25.07■■□□□ 1.6
SMC5Q8IY18 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SMC5Q8IY18 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC25.07■■□□□ 1.6
SMC5Q8IY18 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC25.07■■□□□ 1.6
SMC5Q8IY18 GAS2L1P2-201ENST00000436355 1356 ntBASIC25.06■■□□□ 1.6
SMC5Q8IY18 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SMC5Q8IY18 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SMC5Q8IY18 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
SMC5Q8IY18 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC25.06■■□□□ 1.6
SMC5Q8IY18 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC25.06■■□□□ 1.6
SMC5Q8IY18 APTR-203ENST00000430801 583 ntTSL 5 BASIC25.06■■□□□ 1.6
SMC5Q8IY18 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
SMC5Q8IY18 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SMC5Q8IY18 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SMC5Q8IY18 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC25.06■■□□□ 1.6
SMC5Q8IY18 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SMC5Q8IY18 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
SMC5Q8IY18 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SMC5Q8IY18 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SMC5Q8IY18 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC25.05■■□□□ 1.6
SMC5Q8IY18 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC25.05■■□□□ 1.6
SMC5Q8IY18 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
SMC5Q8IY18 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
SMC5Q8IY18 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC25.05■■□□□ 1.6
SMC5Q8IY18 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
SMC5Q8IY18 PARP1-210ENST00000629232 477 ntTSL 5 BASIC25.05■■□□□ 1.6
SMC5Q8IY18 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SMC5Q8IY18 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC25.05■■□□□ 1.6
SMC5Q8IY18 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
SMC5Q8IY18 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SMC5Q8IY18 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC25.05■■□□□ 1.6
SMC5Q8IY18 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SMC5Q8IY18 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC25.04■■□□□ 1.6
SMC5Q8IY18 CD37-204ENST00000535669 1674 ntTSL 2 BASIC25.04■■□□□ 1.6
SMC5Q8IY18 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SMC5Q8IY18 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC25.04■■□□□ 1.6
SMC5Q8IY18 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SMC5Q8IY18 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC25.04■■□□□ 1.6
SMC5Q8IY18 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SMC5Q8IY18 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SMC5Q8IY18 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
SMC5Q8IY18 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC25.04■■□□□ 1.6
SMC5Q8IY18 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC25.04■■□□□ 1.6
SMC5Q8IY18 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SMC5Q8IY18 GCK-205ENST00000437084 1385 ntTSL 5 BASIC25.04■■□□□ 1.6
SMC5Q8IY18 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
SMC5Q8IY18 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
SMC5Q8IY18 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC25.04■■□□□ 1.6
SMC5Q8IY18 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SMC5Q8IY18 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC25.04■■□□□ 1.6
SMC5Q8IY18 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SMC5Q8IY18 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SMC5Q8IY18 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
SMC5Q8IY18 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SMC5Q8IY18 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SMC5Q8IY18 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC25.03■■□□□ 1.6
SMC5Q8IY18 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SMC5Q8IY18 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SMC5Q8IY18 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC25.03■■□□□ 1.6
SMC5Q8IY18 CYP2T1P-201ENST00000432607 1285 ntBASIC25.03■■□□□ 1.6
SMC5Q8IY18 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC25.03■■□□□ 1.6
SMC5Q8IY18 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC25.03■■□□□ 1.6
SMC5Q8IY18 BID-214ENST00000617586 542 ntTSL 5 BASIC25.03■■□□□ 1.6
SMC5Q8IY18 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC25.03■■□□□ 1.6
SMC5Q8IY18 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC25.03■■□□□ 1.6
SMC5Q8IY18 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SMC5Q8IY18 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SMC5Q8IY18 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SMC5Q8IY18 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
SMC5Q8IY18 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
SMC5Q8IY18 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SMC5Q8IY18 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SMC5Q8IY18 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SMC5Q8IY18 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SMC5Q8IY18 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC25.02■■□□□ 1.6
SMC5Q8IY18 PKD1P6-201ENST00000343738 4769 ntBASIC25.02■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms