Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
UBR1Q8IWV7 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC29.06■■■□□ 2.24
UBR1Q8IWV7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC29.06■■■□□ 2.24
UBR1Q8IWV7 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC29.06■■■□□ 2.24
UBR1Q8IWV7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC29.05■■■□□ 2.24
UBR1Q8IWV7 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
UBR1Q8IWV7 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC29.05■■■□□ 2.24
UBR1Q8IWV7 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC29.05■■■□□ 2.24
UBR1Q8IWV7 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC29.05■■■□□ 2.24
UBR1Q8IWV7 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC29.05■■■□□ 2.24
UBR1Q8IWV7 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC29.05■■■□□ 2.24
UBR1Q8IWV7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC29.05■■■□□ 2.24
UBR1Q8IWV7 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
UBR1Q8IWV7 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC29.04■■■□□ 2.24
UBR1Q8IWV7 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
UBR1Q8IWV7 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC29.04■■■□□ 2.24
UBR1Q8IWV7 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC29.04■■■□□ 2.24
UBR1Q8IWV7 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC29.04■■■□□ 2.24
UBR1Q8IWV7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
UBR1Q8IWV7 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
UBR1Q8IWV7 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
UBR1Q8IWV7 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
UBR1Q8IWV7 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC29.04■■■□□ 2.24
UBR1Q8IWV7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC29.04■■■□□ 2.24
UBR1Q8IWV7 AC087388.1-201ENST00000571370 1112 ntBASIC29.04■■■□□ 2.24
UBR1Q8IWV7 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
UBR1Q8IWV7 MIR2861-201ENST00000636310 90 ntBASIC29.04■■■□□ 2.24
UBR1Q8IWV7 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC29.04■■■□□ 2.24
UBR1Q8IWV7 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC29.04■■■□□ 2.24
UBR1Q8IWV7 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC29.04■■■□□ 2.24
UBR1Q8IWV7 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC29.04■■■□□ 2.24
UBR1Q8IWV7 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
UBR1Q8IWV7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
UBR1Q8IWV7 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
UBR1Q8IWV7 MESTP1-201ENST00000404287 994 ntBASIC29.03■■■□□ 2.24
UBR1Q8IWV7 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
UBR1Q8IWV7 C2orf69P3-201ENST00000565542 1120 ntBASIC29.03■■■□□ 2.24
UBR1Q8IWV7 C1QL1P1-201ENST00000568105 661 ntBASIC29.03■■■□□ 2.24
UBR1Q8IWV7 AC026271.3-201ENST00000571884 352 ntBASIC29.03■■■□□ 2.24
UBR1Q8IWV7 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC29.03■■■□□ 2.24
UBR1Q8IWV7 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
UBR1Q8IWV7 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC29.03■■■□□ 2.24
UBR1Q8IWV7 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
UBR1Q8IWV7 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
UBR1Q8IWV7 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
UBR1Q8IWV7 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
UBR1Q8IWV7 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC29.03■■■□□ 2.24
UBR1Q8IWV7 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC29.03■■■□□ 2.24
UBR1Q8IWV7 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
UBR1Q8IWV7 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
UBR1Q8IWV7 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC29.03■■■□□ 2.24
UBR1Q8IWV7 PTBP1P-201ENST00000554374 1601 ntBASIC29.03■■■□□ 2.24
UBR1Q8IWV7 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC29.03■■■□□ 2.24
UBR1Q8IWV7 METTL23-204ENST00000586752 904 ntTSL 2 BASIC29.03■■■□□ 2.24
UBR1Q8IWV7 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC29.03■■■□□ 2.24
UBR1Q8IWV7 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC29.02■■■□□ 2.24
UBR1Q8IWV7 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC29.02■■■□□ 2.24
UBR1Q8IWV7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC29.02■■■□□ 2.24
UBR1Q8IWV7 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC29.02■■■□□ 2.24
UBR1Q8IWV7 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
UBR1Q8IWV7 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC29.02■■■□□ 2.24
UBR1Q8IWV7 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.24
UBR1Q8IWV7 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC29.01■■■□□ 2.24
UBR1Q8IWV7 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.24
UBR1Q8IWV7 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
UBR1Q8IWV7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC29.01■■■□□ 2.23
UBR1Q8IWV7 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC29.01■■■□□ 2.23
UBR1Q8IWV7 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC29.01■■■□□ 2.23
UBR1Q8IWV7 PRR31-201ENST00000371629 978 ntTSL 2 BASIC29.01■■■□□ 2.23
UBR1Q8IWV7 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC29.01■■■□□ 2.23
UBR1Q8IWV7 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC29.01■■■□□ 2.23
UBR1Q8IWV7 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
UBR1Q8IWV7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
UBR1Q8IWV7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC29.01■■■□□ 2.23
UBR1Q8IWV7 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
UBR1Q8IWV7 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
UBR1Q8IWV7 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC29■■■□□ 2.23
UBR1Q8IWV7 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC29■■■□□ 2.23
UBR1Q8IWV7 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC29■■■□□ 2.23
UBR1Q8IWV7 CR392000.1-201ENST00000624770 1228 ntBASIC29■■■□□ 2.23
UBR1Q8IWV7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC29■■■□□ 2.23
UBR1Q8IWV7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC29■■■□□ 2.23
UBR1Q8IWV7 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC29■■■□□ 2.23
UBR1Q8IWV7 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
UBR1Q8IWV7 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
UBR1Q8IWV7 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC29■■■□□ 2.23
UBR1Q8IWV7 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC29■■■□□ 2.23
UBR1Q8IWV7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC29■■■□□ 2.23
UBR1Q8IWV7 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
UBR1Q8IWV7 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC28.99■■■□□ 2.23
UBR1Q8IWV7 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
UBR1Q8IWV7 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
UBR1Q8IWV7 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC28.99■■■□□ 2.23
UBR1Q8IWV7 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
UBR1Q8IWV7 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC28.99■■■□□ 2.23
UBR1Q8IWV7 NMU-205ENST00000511469 756 ntTSL 3 BASIC28.99■■■□□ 2.23
UBR1Q8IWV7 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC28.99■■■□□ 2.23
UBR1Q8IWV7 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC28.99■■■□□ 2.23
UBR1Q8IWV7 DGCR10-201ENST00000609839 495 ntBASIC28.99■■■□□ 2.23
UBR1Q8IWV7 KRT8P36-201ENST00000489121 1440 ntBASIC28.99■■■□□ 2.23
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms