Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NUDCD3Q8IVD9 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NUDCD3Q8IVD9 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.04■□□□□ 0.8
NUDCD3Q8IVD9 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.04■□□□□ 0.8
NUDCD3Q8IVD9 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.04■□□□□ 0.8
NUDCD3Q8IVD9 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.04■□□□□ 0.8
NUDCD3Q8IVD9 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
NUDCD3Q8IVD9 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NUDCD3Q8IVD9 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
NUDCD3Q8IVD9 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NUDCD3Q8IVD9 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NUDCD3Q8IVD9 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NUDCD3Q8IVD9 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.03■□□□□ 0.8
NUDCD3Q8IVD9 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.03■□□□□ 0.8
NUDCD3Q8IVD9 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.03■□□□□ 0.8
NUDCD3Q8IVD9 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.03■□□□□ 0.8
NUDCD3Q8IVD9 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
NUDCD3Q8IVD9 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.03■□□□□ 0.8
NUDCD3Q8IVD9 TPRG1LP1-201ENST00000598702 760 ntBASIC20.03■□□□□ 0.8
NUDCD3Q8IVD9 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NUDCD3Q8IVD9 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NUDCD3Q8IVD9 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.03■□□□□ 0.8
NUDCD3Q8IVD9 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NUDCD3Q8IVD9 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NUDCD3Q8IVD9 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
NUDCD3Q8IVD9 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NUDCD3Q8IVD9 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NUDCD3Q8IVD9 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NUDCD3Q8IVD9 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NUDCD3Q8IVD9 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.02■□□□□ 0.8
NUDCD3Q8IVD9 PBX2P1-201ENST00000493219 1291 ntBASIC20.02■□□□□ 0.8
NUDCD3Q8IVD9 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.02■□□□□ 0.8
NUDCD3Q8IVD9 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NUDCD3Q8IVD9 AC120498.10-201ENST00000621827 505 ntBASIC20.02■□□□□ 0.8
NUDCD3Q8IVD9 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.02■□□□□ 0.8
NUDCD3Q8IVD9 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.02■□□□□ 0.8
NUDCD3Q8IVD9 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
NUDCD3Q8IVD9 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.02■□□□□ 0.79
NUDCD3Q8IVD9 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
NUDCD3Q8IVD9 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
NUDCD3Q8IVD9 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
NUDCD3Q8IVD9 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.01■□□□□ 0.79
NUDCD3Q8IVD9 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NUDCD3Q8IVD9 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NUDCD3Q8IVD9 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.01■□□□□ 0.79
NUDCD3Q8IVD9 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NUDCD3Q8IVD9 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NUDCD3Q8IVD9 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NUDCD3Q8IVD9 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NUDCD3Q8IVD9 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NUDCD3Q8IVD9 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.01■□□□□ 0.79
NUDCD3Q8IVD9 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
NUDCD3Q8IVD9 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
NUDCD3Q8IVD9 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NUDCD3Q8IVD9 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
NUDCD3Q8IVD9 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NUDCD3Q8IVD9 TMEM179-206ENST00000616017 1645 ntBASIC20.01■□□□□ 0.79
NUDCD3Q8IVD9 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NUDCD3Q8IVD9 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
NUDCD3Q8IVD9 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.01■□□□□ 0.79
NUDCD3Q8IVD9 AIRN-201ENST00000601203 4374 ntBASIC20.01■□□□□ 0.79
NUDCD3Q8IVD9 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.01■□□□□ 0.79
NUDCD3Q8IVD9 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NUDCD3Q8IVD9 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NUDCD3Q8IVD9 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NUDCD3Q8IVD9 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NUDCD3Q8IVD9 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NUDCD3Q8IVD9 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
NUDCD3Q8IVD9 AL691432.2-201ENST00000607222 2038 ntBASIC20■□□□□ 0.79
NUDCD3Q8IVD9 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20■□□□□ 0.79
NUDCD3Q8IVD9 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NUDCD3Q8IVD9 KRT87P-202ENST00000534226 1464 ntBASIC20■□□□□ 0.79
NUDCD3Q8IVD9 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NUDCD3Q8IVD9 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20■□□□□ 0.79
NUDCD3Q8IVD9 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20■□□□□ 0.79
NUDCD3Q8IVD9 RASA4CP-201ENST00000424092 1398 ntBASIC20■□□□□ 0.79
NUDCD3Q8IVD9 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NUDCD3Q8IVD9 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20■□□□□ 0.79
NUDCD3Q8IVD9 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20■□□□□ 0.79
NUDCD3Q8IVD9 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20■□□□□ 0.79
NUDCD3Q8IVD9 AP001330.3-201ENST00000520123 633 ntBASIC20■□□□□ 0.79
NUDCD3Q8IVD9 AC138907.5-202ENST00000569484 235 ntBASIC20■□□□□ 0.79
NUDCD3Q8IVD9 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20■□□□□ 0.79
NUDCD3Q8IVD9 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NUDCD3Q8IVD9 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
NUDCD3Q8IVD9 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NUDCD3Q8IVD9 DPP3P2-201ENST00000416030 1696 ntBASIC20■□□□□ 0.79
NUDCD3Q8IVD9 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
NUDCD3Q8IVD9 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
NUDCD3Q8IVD9 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20■□□□□ 0.79
NUDCD3Q8IVD9 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20■□□□□ 0.79
NUDCD3Q8IVD9 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NUDCD3Q8IVD9 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NUDCD3Q8IVD9 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NUDCD3Q8IVD9 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NUDCD3Q8IVD9 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NUDCD3Q8IVD9 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NUDCD3Q8IVD9 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.99■□□□□ 0.79
NUDCD3Q8IVD9 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NUDCD3Q8IVD9 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms