Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
COL23A1Q86Y22 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC25.6■■□□□ 1.69
COL23A1Q86Y22 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
COL23A1Q86Y22 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC25.6■■□□□ 1.69
COL23A1Q86Y22 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC25.6■■□□□ 1.69
COL23A1Q86Y22 LIN28AP1-201ENST00000429574 405 ntBASIC25.6■■□□□ 1.69
COL23A1Q86Y22 TPM4P1-201ENST00000436100 807 ntBASIC25.6■■□□□ 1.69
COL23A1Q86Y22 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC25.6■■□□□ 1.69
COL23A1Q86Y22 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC25.6■■□□□ 1.69
COL23A1Q86Y22 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
COL23A1Q86Y22 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
COL23A1Q86Y22 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
COL23A1Q86Y22 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC25.6■■□□□ 1.69
COL23A1Q86Y22 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
COL23A1Q86Y22 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
COL23A1Q86Y22 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
COL23A1Q86Y22 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
COL23A1Q86Y22 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
COL23A1Q86Y22 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC25.59■■□□□ 1.69
COL23A1Q86Y22 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
COL23A1Q86Y22 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
COL23A1Q86Y22 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
COL23A1Q86Y22 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
COL23A1Q86Y22 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
COL23A1Q86Y22 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
COL23A1Q86Y22 ISCU-203ENST00000431221 799 ntTSL 2 BASIC25.59■■□□□ 1.69
COL23A1Q86Y22 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
COL23A1Q86Y22 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
COL23A1Q86Y22 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC25.59■■□□□ 1.69
COL23A1Q86Y22 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC25.59■■□□□ 1.69
COL23A1Q86Y22 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC25.59■■□□□ 1.69
COL23A1Q86Y22 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
COL23A1Q86Y22 KRT16P1-201ENST00000399124 1418 ntBASIC25.59■■□□□ 1.69
COL23A1Q86Y22 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC25.59■■□□□ 1.69
COL23A1Q86Y22 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
COL23A1Q86Y22 AC127496.7-201ENST00000625110 1798 ntBASIC25.59■■□□□ 1.69
COL23A1Q86Y22 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
COL23A1Q86Y22 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
COL23A1Q86Y22 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC25.58■■□□□ 1.69
COL23A1Q86Y22 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
COL23A1Q86Y22 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
COL23A1Q86Y22 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
COL23A1Q86Y22 ECEL1P2-202ENST00000465689 757 ntBASIC25.58■■□□□ 1.69
COL23A1Q86Y22 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
COL23A1Q86Y22 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC25.58■■□□□ 1.69
COL23A1Q86Y22 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC25.58■■□□□ 1.68
COL23A1Q86Y22 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
COL23A1Q86Y22 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC25.58■■□□□ 1.68
COL23A1Q86Y22 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC25.57■■□□□ 1.68
COL23A1Q86Y22 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
COL23A1Q86Y22 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC25.57■■□□□ 1.68
COL23A1Q86Y22 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC25.57■■□□□ 1.68
COL23A1Q86Y22 ATP5G1P1-201ENST00000448724 379 ntBASIC25.57■■□□□ 1.68
COL23A1Q86Y22 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
COL23A1Q86Y22 AC091076.1-201ENST00000610741 619 ntBASIC25.57■■□□□ 1.68
COL23A1Q86Y22 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
COL23A1Q86Y22 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
COL23A1Q86Y22 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
COL23A1Q86Y22 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
COL23A1Q86Y22 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
COL23A1Q86Y22 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
COL23A1Q86Y22 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
COL23A1Q86Y22 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC25.56■■□□□ 1.68
COL23A1Q86Y22 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
COL23A1Q86Y22 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
COL23A1Q86Y22 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
COL23A1Q86Y22 PRR31-201ENST00000371629 978 ntTSL 2 BASIC25.56■■□□□ 1.68
COL23A1Q86Y22 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
COL23A1Q86Y22 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
COL23A1Q86Y22 KRT126P-201ENST00000549467 1181 ntBASIC25.56■■□□□ 1.68
COL23A1Q86Y22 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
COL23A1Q86Y22 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
COL23A1Q86Y22 AC027702.1-201ENST00000563810 1770 ntBASIC25.56■■□□□ 1.68
COL23A1Q86Y22 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
COL23A1Q86Y22 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC25.55■■□□□ 1.68
COL23A1Q86Y22 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC25.55■■□□□ 1.68
COL23A1Q86Y22 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
COL23A1Q86Y22 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC25.55■■□□□ 1.68
COL23A1Q86Y22 AK4P3-201ENST00000418260 669 ntBASIC25.55■■□□□ 1.68
COL23A1Q86Y22 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC25.55■■□□□ 1.68
COL23A1Q86Y22 AC022616.7-201ENST00000525383 220 ntBASIC25.55■■□□□ 1.68
COL23A1Q86Y22 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC25.55■■□□□ 1.68
COL23A1Q86Y22 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC25.55■■□□□ 1.68
COL23A1Q86Y22 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
COL23A1Q86Y22 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
COL23A1Q86Y22 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
COL23A1Q86Y22 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
COL23A1Q86Y22 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
COL23A1Q86Y22 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
COL23A1Q86Y22 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC25.54■■□□□ 1.68
COL23A1Q86Y22 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
COL23A1Q86Y22 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
COL23A1Q86Y22 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
COL23A1Q86Y22 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
COL23A1Q86Y22 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC25.54■■□□□ 1.68
COL23A1Q86Y22 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
COL23A1Q86Y22 MESTP1-201ENST00000404287 994 ntBASIC25.54■■□□□ 1.68
COL23A1Q86Y22 AC063952.2-201ENST00000498792 1227 ntBASIC25.54■■□□□ 1.68
COL23A1Q86Y22 KRT18P56-201ENST00000507275 550 ntBASIC25.54■■□□□ 1.68
COL23A1Q86Y22 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms