Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.57■□□□□ 0.56
CHMP1BQ7LBR1 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.57■□□□□ 0.56
CHMP1BQ7LBR1 MIR4758-201ENST00000577688 71 ntBASIC18.57■□□□□ 0.56
CHMP1BQ7LBR1 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
CHMP1BQ7LBR1 FAM21FP-204ENST00000608637 956 ntBASIC18.57■□□□□ 0.56
CHMP1BQ7LBR1 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP1BQ7LBR1 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP1BQ7LBR1 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.57■□□□□ 0.56
CHMP1BQ7LBR1 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP1BQ7LBR1 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP1BQ7LBR1 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP1BQ7LBR1 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP1BQ7LBR1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.57■□□□□ 0.56
CHMP1BQ7LBR1 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.57■□□□□ 0.56
CHMP1BQ7LBR1 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.57■□□□□ 0.56
CHMP1BQ7LBR1 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP1BQ7LBR1 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP1BQ7LBR1 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CHMP1BQ7LBR1 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP1BQ7LBR1 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CHMP1BQ7LBR1 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP1BQ7LBR1 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP1BQ7LBR1 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CHMP1BQ7LBR1 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP1BQ7LBR1 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP1BQ7LBR1 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP1BQ7LBR1 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP1BQ7LBR1 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP1BQ7LBR1 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.56■□□□□ 0.56
CHMP1BQ7LBR1 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.56■□□□□ 0.56
CHMP1BQ7LBR1 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.56■□□□□ 0.56
CHMP1BQ7LBR1 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.56■□□□□ 0.56
CHMP1BQ7LBR1 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.56■□□□□ 0.56
CHMP1BQ7LBR1 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP1BQ7LBR1 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.56■□□□□ 0.56
CHMP1BQ7LBR1 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.56■□□□□ 0.56
CHMP1BQ7LBR1 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP1BQ7LBR1 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.56■□□□□ 0.56
CHMP1BQ7LBR1 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP1BQ7LBR1 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP1BQ7LBR1 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP1BQ7LBR1 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP1BQ7LBR1 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP1BQ7LBR1 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP1BQ7LBR1 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.55■□□□□ 0.56
CHMP1BQ7LBR1 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP1BQ7LBR1 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP1BQ7LBR1 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP1BQ7LBR1 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP1BQ7LBR1 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
CHMP1BQ7LBR1 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.55■□□□□ 0.56
CHMP1BQ7LBR1 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP1BQ7LBR1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP1BQ7LBR1 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.55■□□□□ 0.56
CHMP1BQ7LBR1 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP1BQ7LBR1 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.55■□□□□ 0.56
CHMP1BQ7LBR1 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP1BQ7LBR1 AC093787.1-201ENST00000450396 207 ntBASIC18.55■□□□□ 0.56
CHMP1BQ7LBR1 AL138781.1-201ENST00000566567 1274 ntBASIC18.55■□□□□ 0.56
CHMP1BQ7LBR1 AC133041.1-202ENST00000642053 222 ntBASIC18.55■□□□□ 0.56
CHMP1BQ7LBR1 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP1BQ7LBR1 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP1BQ7LBR1 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CHMP1BQ7LBR1 AC116050.2-201ENST00000612102 1779 ntBASIC18.55■□□□□ 0.56
CHMP1BQ7LBR1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP1BQ7LBR1 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP1BQ7LBR1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP1BQ7LBR1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.55■□□□□ 0.56
CHMP1BQ7LBR1 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP1BQ7LBR1 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP1BQ7LBR1 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP1BQ7LBR1 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP1BQ7LBR1 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP1BQ7LBR1 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP1BQ7LBR1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.54■□□□□ 0.56
CHMP1BQ7LBR1 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP1BQ7LBR1 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP1BQ7LBR1 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.54■□□□□ 0.56
CHMP1BQ7LBR1 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP1BQ7LBR1 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.54■□□□□ 0.56
CHMP1BQ7LBR1 BX276092.2-201ENST00000417668 665 ntBASIC18.54■□□□□ 0.56
CHMP1BQ7LBR1 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.54■□□□□ 0.56
CHMP1BQ7LBR1 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.54■□□□□ 0.56
CHMP1BQ7LBR1 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP1BQ7LBR1 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
CHMP1BQ7LBR1 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP1BQ7LBR1 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP1BQ7LBR1 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP1BQ7LBR1 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CHMP1BQ7LBR1 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CHMP1BQ7LBR1 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP1BQ7LBR1 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP1BQ7LBR1 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CHMP1BQ7LBR1 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.53■□□□□ 0.56
CHMP1BQ7LBR1 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CHMP1BQ7LBR1 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.53■□□□□ 0.56
CHMP1BQ7LBR1 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
CHMP1BQ7LBR1 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP1BQ7LBR1 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
CHMP1BQ7LBR1 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms