Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.61■□□□□ 0.73
RNF111Q6ZNA4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.61■□□□□ 0.73
RNF111Q6ZNA4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.61■□□□□ 0.73
RNF111Q6ZNA4 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
RNF111Q6ZNA4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RNF111Q6ZNA4 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF111Q6ZNA4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.61■□□□□ 0.73
RNF111Q6ZNA4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.6■□□□□ 0.73
RNF111Q6ZNA4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF111Q6ZNA4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.6■□□□□ 0.73
RNF111Q6ZNA4 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF111Q6ZNA4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF111Q6ZNA4 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RNF111Q6ZNA4 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.6■□□□□ 0.73
RNF111Q6ZNA4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF111Q6ZNA4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF111Q6ZNA4 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF111Q6ZNA4 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.6■□□□□ 0.73
RNF111Q6ZNA4 AC137761.2-201ENST00000561729 223 ntBASIC19.6■□□□□ 0.73
RNF111Q6ZNA4 AC145350.3-201ENST00000569033 163 ntBASIC19.6■□□□□ 0.73
RNF111Q6ZNA4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.6■□□□□ 0.73
RNF111Q6ZNA4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF111Q6ZNA4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF111Q6ZNA4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RNF111Q6ZNA4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF111Q6ZNA4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.6■□□□□ 0.73
RNF111Q6ZNA4 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF111Q6ZNA4 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.59■□□□□ 0.73
RNF111Q6ZNA4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF111Q6ZNA4 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF111Q6ZNA4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RNF111Q6ZNA4 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF111Q6ZNA4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF111Q6ZNA4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF111Q6ZNA4 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RNF111Q6ZNA4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF111Q6ZNA4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.59■□□□□ 0.73
RNF111Q6ZNA4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.59■□□□□ 0.73
RNF111Q6ZNA4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RNF111Q6ZNA4 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF111Q6ZNA4 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF111Q6ZNA4 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF111Q6ZNA4 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RNF111Q6ZNA4 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RNF111Q6ZNA4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF111Q6ZNA4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF111Q6ZNA4 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.58■□□□□ 0.73
RNF111Q6ZNA4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF111Q6ZNA4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RNF111Q6ZNA4 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RNF111Q6ZNA4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF111Q6ZNA4 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF111Q6ZNA4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RNF111Q6ZNA4 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF111Q6ZNA4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.58■□□□□ 0.72
RNF111Q6ZNA4 AC016769.1-201ENST00000409132 1010 ntBASIC19.58■□□□□ 0.72
RNF111Q6ZNA4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF111Q6ZNA4 POU5F1P4-201ENST00000413175 1085 ntBASIC19.58■□□□□ 0.72
RNF111Q6ZNA4 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RNF111Q6ZNA4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.58■□□□□ 0.72
RNF111Q6ZNA4 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.58■□□□□ 0.72
RNF111Q6ZNA4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.58■□□□□ 0.72
RNF111Q6ZNA4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.58■□□□□ 0.72
RNF111Q6ZNA4 AC022517.1-201ENST00000592429 346 ntBASIC19.58■□□□□ 0.72
RNF111Q6ZNA4 AC120498.10-201ENST00000621827 505 ntBASIC19.58■□□□□ 0.72
RNF111Q6ZNA4 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RNF111Q6ZNA4 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF111Q6ZNA4 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF111Q6ZNA4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
RNF111Q6ZNA4 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF111Q6ZNA4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
RNF111Q6ZNA4 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF111Q6ZNA4 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF111Q6ZNA4 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF111Q6ZNA4 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.57■□□□□ 0.72
RNF111Q6ZNA4 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF111Q6ZNA4 FP700111.2-201ENST00000619190 1892 ntBASIC19.57■□□□□ 0.72
RNF111Q6ZNA4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF111Q6ZNA4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.57■□□□□ 0.72
RNF111Q6ZNA4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF111Q6ZNA4 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
RNF111Q6ZNA4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RNF111Q6ZNA4 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF111Q6ZNA4 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF111Q6ZNA4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.57■□□□□ 0.72
RNF111Q6ZNA4 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RNF111Q6ZNA4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF111Q6ZNA4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF111Q6ZNA4 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF111Q6ZNA4 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
RNF111Q6ZNA4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF111Q6ZNA4 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF111Q6ZNA4 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF111Q6ZNA4 AC026471.1-201ENST00000564629 3026 ntBASIC19.56■□□□□ 0.72
RNF111Q6ZNA4 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF111Q6ZNA4 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RNF111Q6ZNA4 KRT18P20-201ENST00000548986 1279 ntBASIC19.56■□□□□ 0.72
RNF111Q6ZNA4 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.56■□□□□ 0.72
RNF111Q6ZNA4 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
RNF111Q6ZNA4 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms