Protein–RNA interactions for Protein: Q6YHK3

CD109, CD109 antigen, humanhuman

Predictions only

Length 1,445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD109Q6YHK3 LINC01238-205ENST00000567549 1107 ntBASIC31.08■■■□□ 2.57
CD109Q6YHK3 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC31.08■■■□□ 2.57
CD109Q6YHK3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC31.08■■■□□ 2.57
CD109Q6YHK3 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC31.08■■■□□ 2.57
CD109Q6YHK3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC31.08■■■□□ 2.57
CD109Q6YHK3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CD109Q6YHK3 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC31.08■■■□□ 2.57
CD109Q6YHK3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CD109Q6YHK3 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC31.07■■■□□ 2.57
CD109Q6YHK3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.57
CD109Q6YHK3 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.57
CD109Q6YHK3 AL031133.1-201ENST00000406807 723 ntBASIC31.07■■■□□ 2.57
CD109Q6YHK3 DUSP5P1-201ENST00000441325 1139 ntBASIC31.07■■■□□ 2.57
CD109Q6YHK3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CD109Q6YHK3 STK25-205ENST00000405883 1904 ntTSL 2 BASIC31.07■■■□□ 2.56
CD109Q6YHK3 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC31.07■■■□□ 2.56
CD109Q6YHK3 COPE-203ENST00000351079 907 ntTSL 2 BASIC31.07■■■□□ 2.56
CD109Q6YHK3 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
CD109Q6YHK3 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.56
CD109Q6YHK3 FAM87A-204ENST00000613235 858 ntBASIC31.07■■■□□ 2.56
CD109Q6YHK3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC31.06■■■□□ 2.56
CD109Q6YHK3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
CD109Q6YHK3 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CD109Q6YHK3 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC31.06■■■□□ 2.56
CD109Q6YHK3 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
CD109Q6YHK3 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC31.06■■■□□ 2.56
CD109Q6YHK3 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
CD109Q6YHK3 AC117947.1-201ENST00000427448 529 ntBASIC31.06■■■□□ 2.56
CD109Q6YHK3 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CD109Q6YHK3 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC31.06■■■□□ 2.56
CD109Q6YHK3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC31.06■■■□□ 2.56
CD109Q6YHK3 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC31.05■■■□□ 2.56
CD109Q6YHK3 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CD109Q6YHK3 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CD109Q6YHK3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CD109Q6YHK3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CD109Q6YHK3 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC31.05■■■□□ 2.56
CD109Q6YHK3 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CD109Q6YHK3 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CD109Q6YHK3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC31.05■■■□□ 2.56
CD109Q6YHK3 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
CD109Q6YHK3 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CD109Q6YHK3 BX664615.1-201ENST00000443558 458 ntBASIC31.05■■■□□ 2.56
CD109Q6YHK3 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC31.05■■■□□ 2.56
CD109Q6YHK3 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CD109Q6YHK3 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CD109Q6YHK3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC31.04■■■□□ 2.56
CD109Q6YHK3 SAPCD2P2-201ENST00000431719 1174 ntBASIC31.04■■■□□ 2.56
CD109Q6YHK3 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC31.04■■■□□ 2.56
CD109Q6YHK3 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC31.04■■■□□ 2.56
CD109Q6YHK3 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC31.04■■■□□ 2.56
CD109Q6YHK3 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CD109Q6YHK3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC31.04■■■□□ 2.56
CD109Q6YHK3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CD109Q6YHK3 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.56
CD109Q6YHK3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC31.03■■■□□ 2.56
CD109Q6YHK3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
CD109Q6YHK3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC31.03■■■□□ 2.56
CD109Q6YHK3 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC31.03■■■□□ 2.56
CD109Q6YHK3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC31.03■■■□□ 2.56
CD109Q6YHK3 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
CD109Q6YHK3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC31.02■■■□□ 2.56
CD109Q6YHK3 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CD109Q6YHK3 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CD109Q6YHK3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC31.02■■■□□ 2.56
CD109Q6YHK3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC31.02■■■□□ 2.56
CD109Q6YHK3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC31.02■■■□□ 2.56
CD109Q6YHK3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
CD109Q6YHK3 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC31.02■■■□□ 2.56
CD109Q6YHK3 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC31.02■■■□□ 2.56
CD109Q6YHK3 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC31.02■■■□□ 2.56
CD109Q6YHK3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC31.02■■■□□ 2.56
CD109Q6YHK3 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC31.02■■■□□ 2.56
CD109Q6YHK3 CLN6-204ENST00000564752 900 ntTSL 3 BASIC31.02■■■□□ 2.56
CD109Q6YHK3 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC31.02■■■□□ 2.56
CD109Q6YHK3 AP000550.4-202ENST00000639755 178 ntBASIC31.02■■■□□ 2.56
CD109Q6YHK3 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC31.02■■■□□ 2.56
CD109Q6YHK3 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC31.01■■■□□ 2.56
CD109Q6YHK3 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC31.01■■■□□ 2.55
CD109Q6YHK3 AC091390.4-202ENST00000476426 537 ntBASIC31.01■■■□□ 2.55
CD109Q6YHK3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CD109Q6YHK3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC31.01■■■□□ 2.55
CD109Q6YHK3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CD109Q6YHK3 AC026271.3-201ENST00000571884 352 ntBASIC31■■■□□ 2.55
CD109Q6YHK3 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC31■■■□□ 2.55
CD109Q6YHK3 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC31■■■□□ 2.55
CD109Q6YHK3 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC31■■■□□ 2.55
CD109Q6YHK3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CD109Q6YHK3 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC30.99■■■□□ 2.55
CD109Q6YHK3 INGX-201ENST00000359239 846 ntBASIC30.99■■■□□ 2.55
CD109Q6YHK3 AC026396.1-201ENST00000419388 421 ntBASIC30.99■■■□□ 2.55
CD109Q6YHK3 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC30.99■■■□□ 2.55
CD109Q6YHK3 GRAMD4P8-201ENST00000605465 1115 ntBASIC30.99■■■□□ 2.55
CD109Q6YHK3 DGCR10-201ENST00000609839 495 ntBASIC30.99■■■□□ 2.55
CD109Q6YHK3 AL031985.4-201ENST00000642138 673 ntBASIC30.99■■■□□ 2.55
CD109Q6YHK3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
CD109Q6YHK3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC30.99■■■□□ 2.55
CD109Q6YHK3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC30.99■■■□□ 2.55
CD109Q6YHK3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
CD109Q6YHK3 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC30.98■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms