Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.15■□□□□ 0.5
LRFN4Q6PJG9 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.15■□□□□ 0.5
LRFN4Q6PJG9 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.15■□□□□ 0.5
LRFN4Q6PJG9 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.15■□□□□ 0.5
LRFN4Q6PJG9 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRFN4Q6PJG9 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
LRFN4Q6PJG9 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
LRFN4Q6PJG9 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRFN4Q6PJG9 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRFN4Q6PJG9 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRFN4Q6PJG9 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRFN4Q6PJG9 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRFN4Q6PJG9 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRFN4Q6PJG9 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
LRFN4Q6PJG9 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRFN4Q6PJG9 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRFN4Q6PJG9 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
LRFN4Q6PJG9 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRFN4Q6PJG9 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.14■□□□□ 0.49
LRFN4Q6PJG9 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRFN4Q6PJG9 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
LRFN4Q6PJG9 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.14■□□□□ 0.49
LRFN4Q6PJG9 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
LRFN4Q6PJG9 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRFN4Q6PJG9 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
LRFN4Q6PJG9 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRFN4Q6PJG9 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.14■□□□□ 0.49
LRFN4Q6PJG9 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRFN4Q6PJG9 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.14■□□□□ 0.49
LRFN4Q6PJG9 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.14■□□□□ 0.49
LRFN4Q6PJG9 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.14■□□□□ 0.49
LRFN4Q6PJG9 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRFN4Q6PJG9 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
LRFN4Q6PJG9 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
LRFN4Q6PJG9 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRFN4Q6PJG9 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.14■□□□□ 0.49
LRFN4Q6PJG9 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.13■□□□□ 0.49
LRFN4Q6PJG9 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRFN4Q6PJG9 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRFN4Q6PJG9 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
LRFN4Q6PJG9 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRFN4Q6PJG9 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
LRFN4Q6PJG9 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRFN4Q6PJG9 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.13■□□□□ 0.49
LRFN4Q6PJG9 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.13■□□□□ 0.49
LRFN4Q6PJG9 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.13■□□□□ 0.49
LRFN4Q6PJG9 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.13■□□□□ 0.49
LRFN4Q6PJG9 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRFN4Q6PJG9 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRFN4Q6PJG9 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRFN4Q6PJG9 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
LRFN4Q6PJG9 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.13■□□□□ 0.49
LRFN4Q6PJG9 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRFN4Q6PJG9 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRFN4Q6PJG9 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.13■□□□□ 0.49
LRFN4Q6PJG9 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRFN4Q6PJG9 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRFN4Q6PJG9 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRFN4Q6PJG9 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
LRFN4Q6PJG9 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
LRFN4Q6PJG9 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRFN4Q6PJG9 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRFN4Q6PJG9 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
LRFN4Q6PJG9 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
LRFN4Q6PJG9 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRFN4Q6PJG9 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
LRFN4Q6PJG9 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
LRFN4Q6PJG9 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRFN4Q6PJG9 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
LRFN4Q6PJG9 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.12■□□□□ 0.49
LRFN4Q6PJG9 AL162412.1-201ENST00000567129 965 ntBASIC18.12■□□□□ 0.49
LRFN4Q6PJG9 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
LRFN4Q6PJG9 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.12■□□□□ 0.49
LRFN4Q6PJG9 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
LRFN4Q6PJG9 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.12■□□□□ 0.49
LRFN4Q6PJG9 MIR2861-201ENST00000636310 90 ntBASIC18.12■□□□□ 0.49
LRFN4Q6PJG9 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.12■□□□□ 0.49
LRFN4Q6PJG9 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRFN4Q6PJG9 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRFN4Q6PJG9 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
LRFN4Q6PJG9 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.12■□□□□ 0.49
LRFN4Q6PJG9 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRFN4Q6PJG9 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRFN4Q6PJG9 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LRFN4Q6PJG9 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LRFN4Q6PJG9 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
LRFN4Q6PJG9 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRFN4Q6PJG9 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
LRFN4Q6PJG9 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRFN4Q6PJG9 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LRFN4Q6PJG9 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.11■□□□□ 0.49
LRFN4Q6PJG9 AC016405.3-201ENST00000607710 860 ntBASIC18.11■□□□□ 0.49
LRFN4Q6PJG9 FAM21FP-204ENST00000608637 956 ntBASIC18.11■□□□□ 0.49
LRFN4Q6PJG9 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.11■□□□□ 0.49
LRFN4Q6PJG9 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRFN4Q6PJG9 AC068338.2-201ENST00000563278 1430 ntBASIC18.11■□□□□ 0.49
LRFN4Q6PJG9 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRFN4Q6PJG9 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
LRFN4Q6PJG9 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.11■□□□□ 0.49
LRFN4Q6PJG9 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms