Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC15.28■□□□□ 0.04
MRPL54Q6P161 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC15.28■□□□□ 0.04
MRPL54Q6P161 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MRPL54Q6P161 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MRPL54Q6P161 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MRPL54Q6P161 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
MRPL54Q6P161 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC15.28■□□□□ 0.04
MRPL54Q6P161 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MRPL54Q6P161 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MRPL54Q6P161 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC15.27■□□□□ 0.04
MRPL54Q6P161 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
MRPL54Q6P161 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC15.27■□□□□ 0.04
MRPL54Q6P161 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
MRPL54Q6P161 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
MRPL54Q6P161 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC15.27■□□□□ 0.04
MRPL54Q6P161 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MRPL54Q6P161 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MRPL54Q6P161 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
MRPL54Q6P161 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MRPL54Q6P161 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
MRPL54Q6P161 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MRPL54Q6P161 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC15.27■□□□□ 0.04
MRPL54Q6P161 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MRPL54Q6P161 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MRPL54Q6P161 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
MRPL54Q6P161 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
MRPL54Q6P161 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
MRPL54Q6P161 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MRPL54Q6P161 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
MRPL54Q6P161 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MRPL54Q6P161 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC15.27■□□□□ 0.03
MRPL54Q6P161 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MRPL54Q6P161 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
MRPL54Q6P161 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
MRPL54Q6P161 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
MRPL54Q6P161 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.27■□□□□ 0.03
MRPL54Q6P161 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MRPL54Q6P161 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MRPL54Q6P161 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
MRPL54Q6P161 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MRPL54Q6P161 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
MRPL54Q6P161 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC15.26■□□□□ 0.03
MRPL54Q6P161 PKD1P1-201ENST00000458669 6805 ntBASIC15.26■□□□□ 0.03
MRPL54Q6P161 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
MRPL54Q6P161 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MRPL54Q6P161 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC15.26■□□□□ 0.03
MRPL54Q6P161 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MRPL54Q6P161 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC15.26■□□□□ 0.03
MRPL54Q6P161 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC15.26■□□□□ 0.03
MRPL54Q6P161 AC010141.3-201ENST00000456659 717 ntBASIC15.26■□□□□ 0.03
MRPL54Q6P161 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MRPL54Q6P161 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MRPL54Q6P161 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MRPL54Q6P161 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MRPL54Q6P161 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC15.26■□□□□ 0.03
MRPL54Q6P161 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC15.26■□□□□ 0.03
MRPL54Q6P161 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
MRPL54Q6P161 FZD10-202ENST00000539839 3282 ntBASIC15.26■□□□□ 0.03
MRPL54Q6P161 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MRPL54Q6P161 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC15.26■□□□□ 0.03
MRPL54Q6P161 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
MRPL54Q6P161 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
MRPL54Q6P161 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
MRPL54Q6P161 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MRPL54Q6P161 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MRPL54Q6P161 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MRPL54Q6P161 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MRPL54Q6P161 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MRPL54Q6P161 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC15.25■□□□□ 0.03
MRPL54Q6P161 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MRPL54Q6P161 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MRPL54Q6P161 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MRPL54Q6P161 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
MRPL54Q6P161 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MRPL54Q6P161 ABHD17AP3-201ENST00000503096 1137 ntBASIC15.25■□□□□ 0.03
MRPL54Q6P161 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC15.25■□□□□ 0.03
MRPL54Q6P161 MIR4449-201ENST00000578365 66 ntBASIC15.25■□□□□ 0.03
MRPL54Q6P161 AC074183.2-201ENST00000623112 922 ntBASIC15.25■□□□□ 0.03
MRPL54Q6P161 AP006587.3-201ENST00000525742 1516 ntBASIC15.25■□□□□ 0.03
MRPL54Q6P161 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MRPL54Q6P161 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MRPL54Q6P161 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
MRPL54Q6P161 AC005332.8-201ENST00000622750 2735 ntBASIC15.25■□□□□ 0.03
MRPL54Q6P161 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MRPL54Q6P161 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
MRPL54Q6P161 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
MRPL54Q6P161 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MRPL54Q6P161 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC15.25■□□□□ 0.03
MRPL54Q6P161 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MRPL54Q6P161 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MRPL54Q6P161 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC15.24■□□□□ 0.03
MRPL54Q6P161 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MRPL54Q6P161 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC15.24■□□□□ 0.03
MRPL54Q6P161 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
MRPL54Q6P161 POLI-202ENST00000406285 2030 ntTSL 2 BASIC15.24■□□□□ 0.03
MRPL54Q6P161 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC15.24■□□□□ 0.03
MRPL54Q6P161 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MRPL54Q6P161 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
MRPL54Q6P161 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC15.24■□□□□ 0.03
MRPL54Q6P161 AC010980.1-201ENST00000587192 1142 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms