Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
VARS2Q5ST30 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
VARS2Q5ST30 MIR1224-201ENST00000408193 85 ntBASIC21.49■■□□□ 1.03
VARS2Q5ST30 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.49■■□□□ 1.03
VARS2Q5ST30 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.49■■□□□ 1.03
VARS2Q5ST30 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.49■■□□□ 1.03
VARS2Q5ST30 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
VARS2Q5ST30 AC023632.3-201ENST00000521633 145 ntBASIC21.49■■□□□ 1.03
VARS2Q5ST30 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
VARS2Q5ST30 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.49■■□□□ 1.03
VARS2Q5ST30 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.49■■□□□ 1.03
VARS2Q5ST30 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.49■■□□□ 1.03
VARS2Q5ST30 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
VARS2Q5ST30 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.49■■□□□ 1.03
VARS2Q5ST30 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
VARS2Q5ST30 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
VARS2Q5ST30 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
VARS2Q5ST30 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
VARS2Q5ST30 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
VARS2Q5ST30 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
VARS2Q5ST30 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
VARS2Q5ST30 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.48■■□□□ 1.03
VARS2Q5ST30 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.48■■□□□ 1.03
VARS2Q5ST30 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
VARS2Q5ST30 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
VARS2Q5ST30 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
VARS2Q5ST30 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.48■■□□□ 1.03
VARS2Q5ST30 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.48■■□□□ 1.03
VARS2Q5ST30 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.48■■□□□ 1.03
VARS2Q5ST30 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
VARS2Q5ST30 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
VARS2Q5ST30 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
VARS2Q5ST30 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.48■■□□□ 1.03
VARS2Q5ST30 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
VARS2Q5ST30 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
VARS2Q5ST30 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
VARS2Q5ST30 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.48■■□□□ 1.03
VARS2Q5ST30 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.48■■□□□ 1.03
VARS2Q5ST30 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.48■■□□□ 1.03
VARS2Q5ST30 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
VARS2Q5ST30 AC124016.1-201ENST00000609552 612 ntBASIC21.48■■□□□ 1.03
VARS2Q5ST30 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
VARS2Q5ST30 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
VARS2Q5ST30 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
VARS2Q5ST30 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
VARS2Q5ST30 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
VARS2Q5ST30 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
VARS2Q5ST30 MIR718-201ENST00000390190 70 ntBASIC21.47■■□□□ 1.03
VARS2Q5ST30 AC239809.2-201ENST00000415381 517 ntBASIC21.47■■□□□ 1.03
VARS2Q5ST30 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
VARS2Q5ST30 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.47■■□□□ 1.03
VARS2Q5ST30 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.47■■□□□ 1.03
VARS2Q5ST30 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.47■■□□□ 1.03
VARS2Q5ST30 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
VARS2Q5ST30 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.47■■□□□ 1.03
VARS2Q5ST30 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.46■■□□□ 1.03
VARS2Q5ST30 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.46■■□□□ 1.03
VARS2Q5ST30 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VARS2Q5ST30 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.46■■□□□ 1.03
VARS2Q5ST30 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VARS2Q5ST30 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
VARS2Q5ST30 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
VARS2Q5ST30 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VARS2Q5ST30 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VARS2Q5ST30 AC133681.1-201ENST00000465482 601 ntBASIC21.46■■□□□ 1.03
VARS2Q5ST30 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.46■■□□□ 1.03
VARS2Q5ST30 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.46■■□□□ 1.03
VARS2Q5ST30 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.46■■□□□ 1.03
VARS2Q5ST30 Z99916.2-201ENST00000604037 246 ntBASIC21.46■■□□□ 1.03
VARS2Q5ST30 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.46■■□□□ 1.03
VARS2Q5ST30 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
VARS2Q5ST30 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VARS2Q5ST30 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.46■■□□□ 1.03
VARS2Q5ST30 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VARS2Q5ST30 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VARS2Q5ST30 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
VARS2Q5ST30 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.45■■□□□ 1.02
VARS2Q5ST30 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
VARS2Q5ST30 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
VARS2Q5ST30 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
VARS2Q5ST30 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
VARS2Q5ST30 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.45■■□□□ 1.02
VARS2Q5ST30 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.45■■□□□ 1.02
VARS2Q5ST30 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.45■■□□□ 1.02
VARS2Q5ST30 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
VARS2Q5ST30 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
VARS2Q5ST30 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
VARS2Q5ST30 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
VARS2Q5ST30 AL121603.2-201ENST00000557373 2117 ntBASIC21.44■■□□□ 1.02
VARS2Q5ST30 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
VARS2Q5ST30 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.44■■□□□ 1.02
VARS2Q5ST30 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
VARS2Q5ST30 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.44■■□□□ 1.02
VARS2Q5ST30 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
VARS2Q5ST30 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
VARS2Q5ST30 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
VARS2Q5ST30 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
VARS2Q5ST30 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.44■■□□□ 1.02
VARS2Q5ST30 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
VARS2Q5ST30 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms