Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.57■□□□□ 0.4
RSPO1Q2MKA7 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RSPO1Q2MKA7 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RSPO1Q2MKA7 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.56■□□□□ 0.4
RSPO1Q2MKA7 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.56■□□□□ 0.4
RSPO1Q2MKA7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
RSPO1Q2MKA7 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
RSPO1Q2MKA7 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RSPO1Q2MKA7 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RSPO1Q2MKA7 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RSPO1Q2MKA7 AFG3L1P-217ENST00000557444 2447 ntBASIC17.56■□□□□ 0.4
RSPO1Q2MKA7 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RSPO1Q2MKA7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RSPO1Q2MKA7 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.56■□□□□ 0.4
RSPO1Q2MKA7 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.56■□□□□ 0.4
RSPO1Q2MKA7 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.56■□□□□ 0.4
RSPO1Q2MKA7 AC008694.1-202ENST00000636953 945 ntBASIC17.56■□□□□ 0.4
RSPO1Q2MKA7 PTBP1P-201ENST00000554374 1601 ntBASIC17.56■□□□□ 0.4
RSPO1Q2MKA7 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RSPO1Q2MKA7 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RSPO1Q2MKA7 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
RSPO1Q2MKA7 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.56■□□□□ 0.4
RSPO1Q2MKA7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RSPO1Q2MKA7 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RSPO1Q2MKA7 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RSPO1Q2MKA7 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RSPO1Q2MKA7 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
RSPO1Q2MKA7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RSPO1Q2MKA7 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RSPO1Q2MKA7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RSPO1Q2MKA7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.55■□□□□ 0.4
RSPO1Q2MKA7 AC105020.6-201ENST00000621523 1217 ntBASIC17.55■□□□□ 0.4
RSPO1Q2MKA7 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.55■□□□□ 0.4
RSPO1Q2MKA7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.55■□□□□ 0.4
RSPO1Q2MKA7 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RSPO1Q2MKA7 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RSPO1Q2MKA7 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RSPO1Q2MKA7 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RSPO1Q2MKA7 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RSPO1Q2MKA7 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RSPO1Q2MKA7 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RSPO1Q2MKA7 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RSPO1Q2MKA7 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RSPO1Q2MKA7 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RSPO1Q2MKA7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.55■□□□□ 0.4
RSPO1Q2MKA7 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RSPO1Q2MKA7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RSPO1Q2MKA7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RSPO1Q2MKA7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.54■□□□□ 0.4
RSPO1Q2MKA7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RSPO1Q2MKA7 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RSPO1Q2MKA7 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.54■□□□□ 0.4
RSPO1Q2MKA7 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
RSPO1Q2MKA7 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RSPO1Q2MKA7 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RSPO1Q2MKA7 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RSPO1Q2MKA7 CROCCP5-201ENST00000436658 830 ntBASIC17.54■□□□□ 0.4
RSPO1Q2MKA7 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
RSPO1Q2MKA7 AC026185.1-201ENST00000445748 174 ntBASIC17.54■□□□□ 0.4
RSPO1Q2MKA7 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.54■□□□□ 0.4
RSPO1Q2MKA7 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RSPO1Q2MKA7 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RSPO1Q2MKA7 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RSPO1Q2MKA7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
RSPO1Q2MKA7 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.54■□□□□ 0.4
RSPO1Q2MKA7 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.54■□□□□ 0.4
RSPO1Q2MKA7 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RSPO1Q2MKA7 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RSPO1Q2MKA7 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RSPO1Q2MKA7 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RSPO1Q2MKA7 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RSPO1Q2MKA7 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RSPO1Q2MKA7 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RSPO1Q2MKA7 KRT17P1-201ENST00000399211 1546 ntBASIC17.53■□□□□ 0.4
RSPO1Q2MKA7 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RSPO1Q2MKA7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RSPO1Q2MKA7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RSPO1Q2MKA7 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.53■□□□□ 0.4
RSPO1Q2MKA7 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RSPO1Q2MKA7 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
RSPO1Q2MKA7 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.53■□□□□ 0.4
RSPO1Q2MKA7 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.53■□□□□ 0.4
RSPO1Q2MKA7 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.53■□□□□ 0.4
RSPO1Q2MKA7 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RSPO1Q2MKA7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RSPO1Q2MKA7 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.52■□□□□ 0.4
RSPO1Q2MKA7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RSPO1Q2MKA7 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RSPO1Q2MKA7 AL691432.2-201ENST00000607222 2038 ntBASIC17.52■□□□□ 0.4
RSPO1Q2MKA7 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RSPO1Q2MKA7 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RSPO1Q2MKA7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
RSPO1Q2MKA7 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RSPO1Q2MKA7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.52■□□□□ 0.4
RSPO1Q2MKA7 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
RSPO1Q2MKA7 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.52■□□□□ 0.4
RSPO1Q2MKA7 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.52■□□□□ 0.4
RSPO1Q2MKA7 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RSPO1Q2MKA7 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.52■□□□□ 0.4
RSPO1Q2MKA7 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms