Protein–RNA interactions for Protein: Q12348

RRI2, COP9 signalosome complex subunit 10, yeastyeast

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRI2Q12348 VPS15YBR097W 4365 nt1.92□□□□□ -2.1
RRI2Q12348 YGR265WYGR265W 411 nt1.91□□□□□ -2.1
RRI2Q12348 YLR101CYLR101C 396 nt1.91□□□□□ -2.1
RRI2Q12348 YMR153C-AYMR153C-A 336 nt1.91□□□□□ -2.1
RRI2Q12348 OSH6YKR003W 1347 nt1.91□□□□□ -2.1
RRI2Q12348 YER087C-AYER087C-A 552 nt1.9□□□□□ -2.11
RRI2Q12348 YJL007CYJL007C 315 nt1.9□□□□□ -2.11
RRI2Q12348 ABM1YJR108W 372 nt1.9□□□□□ -2.11
RRI2Q12348 MCM22YJR135C 720 nt1.9□□□□□ -2.11
RRI2Q12348 NFU1YKL040C 771 nt1.9□□□□□ -2.11
RRI2Q12348 ZEO1YOL109W 342 nt1.9□□□□□ -2.11
RRI2Q12348 CTF4YPR135W 2784 nt1.89□□□□□ -2.11
RRI2Q12348 HDA3YPR179C 1968 nt1.89□□□□□ -2.11
RRI2Q12348 SKI3YPR189W 4299 nt1.89□□□□□ -2.11
RRI2Q12348 SWI5YDR146C 2130 nt1.89□□□□□ -2.11
RRI2Q12348 tT(UGU)HtT(UGU)H 72 nt1.89□□□□□ -2.11
RRI2Q12348 YCL046WYCL046W 324 nt1.89□□□□□ -2.11
RRI2Q12348 BRR2YER172C 6492 nt1.89□□□□□ -2.11
RRI2Q12348 IRC20YLR247C 4671 nt1.88□□□□□ -2.11
RRI2Q12348 YOR019WYOR019W 2193 nt1.88□□□□□ -2.11
RRI2Q12348 YGL239CYGL239C 315 nt1.88□□□□□ -2.11
RRI2Q12348 YOR146WYOR146W 306 nt1.88□□□□□ -2.11
RRI2Q12348 UTP21YLR409C 2820 nt1.87□□□□□ -2.11
RRI2Q12348 YDR509WYDR509W 348 nt1.87□□□□□ -2.11
RRI2Q12348 YHR028W-AYHR028W-A 321 nt1.87□□□□□ -2.11
RRI2Q12348 PAU18YLL064C 363 nt1.87□□□□□ -2.11
RRI2Q12348 PAU6YNR076W 363 nt1.87□□□□□ -2.11
RRI2Q12348 YPL182CYPL182C 384 nt1.87□□□□□ -2.11
RRI2Q12348 RVS161YCR009C 798 nt1.86□□□□□ -2.11
RRI2Q12348 MON2YNL297C 4911 nt1.86□□□□□ -2.11
RRI2Q12348 ZRG17YNR039C 1818 nt1.85□□□□□ -2.11
RRI2Q12348 YHR210CYHR210C 1026 nt1.85□□□□□ -2.11
RRI2Q12348 YMR230W-AYMR230W-A 189 nt1.85□□□□□ -2.11
RRI2Q12348 YMR247W-AYMR247W-A 144 nt1.85□□□□□ -2.11
RRI2Q12348 ERP4YOR016C 624 nt1.85□□□□□ -2.11
RRI2Q12348 CDC31YOR257W 486 nt1.85□□□□□ -2.11
RRI2Q12348 SPO24YPR036W-A 204 nt1.85□□□□□ -2.11
RRI2Q12348 YLR035C-AYLR035C-A 3468 nt1.85□□□□□ -2.11
RRI2Q12348 YDR008CYDR008C 351 nt1.84□□□□□ -2.11
RRI2Q12348 RUF22RUF22 515 nt1.84□□□□□ -2.11
RRI2Q12348 YPL205CYPL205C 345 nt1.84□□□□□ -2.11
RRI2Q12348 LRE1YCL051W 1752 nt1.84□□□□□ -2.12
RRI2Q12348 MSH5YDL154W 2706 nt1.84□□□□□ -2.12
RRI2Q12348 MKT1YNL085W 2493 nt1.83□□□□□ -2.12
RRI2Q12348 TBS1YBR150C 3285 nt1.83□□□□□ -2.12
RRI2Q12348 YLR287CYLR287C 1068 nt1.83□□□□□ -2.12
RRI2Q12348 YBL071CYBL071C 309 nt1.83□□□□□ -2.12
RRI2Q12348 YOR032W-AYOR032W-A 201 nt1.83□□□□□ -2.12
RRI2Q12348 YPR177CYPR177C 372 nt1.83□□□□□ -2.12
RRI2Q12348 DIE2YGR227W 1578 nt1.83□□□□□ -2.12
RRI2Q12348 ZIP1YDR285W 2628 nt1.83□□□□□ -2.12
RRI2Q12348 YKL063CYKL063C 504 nt1.82□□□□□ -2.12
RRI2Q12348 YLR146W-AYLR146W-A 189 nt1.82□□□□□ -2.12
RRI2Q12348 HHT1YBR010W 411 nt1.82□□□□□ -2.12
RRI2Q12348 SBE22YHR103W 2559 nt1.82□□□□□ -2.12
RRI2Q12348 SWI6YLR182W 2412 nt1.81□□□□□ -2.12
RRI2Q12348 YIL102CYIL102C 306 nt1.81□□□□□ -2.12
RRI2Q12348 RPS27AYKL156W 249 nt1.81□□□□□ -2.12
RRI2Q12348 CAT8YMR280C 4302 nt1.81□□□□□ -2.12
RRI2Q12348 YHL009W-AYHL009W-A 1242 nt1.8□□□□□ -2.12
RRI2Q12348 YIL066W-AYIL066W-A 444 nt1.8□□□□□ -2.12
RRI2Q12348 PFD1YJL179W 330 nt1.8□□□□□ -2.12
RRI2Q12348 SXM1YDR395W 2835 nt1.8□□□□□ -2.12
RRI2Q12348 HSL1YKL101W 4557 nt1.79□□□□□ -2.12
RRI2Q12348 YOR192C-CYOR192C-C 237 nt1.79□□□□□ -2.12
RRI2Q12348 MLH3YPL164C 2148 nt1.79□□□□□ -2.12
RRI2Q12348 CHS1YNL192W 3396 nt1.78□□□□□ -2.12
RRI2Q12348 RPL32YBL092W 393 nt1.78□□□□□ -2.12
RRI2Q12348 BST1YFL025C 3090 nt1.78□□□□□ -2.12
RRI2Q12348 YDR003W-AYDR003W-A 123 nt1.77□□□□□ -2.13
RRI2Q12348 YOP1YPR028W 543 nt1.77□□□□□ -2.13
RRI2Q12348 SEC5YDR166C 2916 nt1.76□□□□□ -2.13
RRI2Q12348 KCS1YDR017C 3153 nt1.75□□□□□ -2.13
RRI2Q12348 NCA2YPR155C 1851 nt1.75□□□□□ -2.13
RRI2Q12348 CBS1YDL069C 690 nt1.75□□□□□ -2.13
RRI2Q12348 TIM13YGR181W 318 nt1.75□□□□□ -2.13
RRI2Q12348 EMC5YIL027C 426 nt1.75□□□□□ -2.13
RRI2Q12348 PHS1YJL097W 654 nt1.75□□□□□ -2.13
RRI2Q12348 YLR406C-AYLR406C-A 150 nt1.75□□□□□ -2.13
RRI2Q12348 GDS1YOR355W 1569 nt1.75□□□□□ -2.13
RRI2Q12348 IRA1YBR140C 9279 nt1.75□□□□□ -2.13
RRI2Q12348 SPO23YBR250W 1572 nt1.74□□□□□ -2.13
RRI2Q12348 RTT102YGR275W 474 nt1.74□□□□□ -2.13
RRI2Q12348 YJL022WYJL022W 309 nt1.74□□□□□ -2.13
RRI2Q12348 VPS20YMR077C 666 nt1.74□□□□□ -2.13
RRI2Q12348 LYS14YDR034C 2373 nt1.74□□□□□ -2.13
RRI2Q12348 DGR2YKL121W 2559 nt1.74□□□□□ -2.13
RRI2Q12348 PXA2YKL188C 2562 nt1.73□□□□□ -2.13
RRI2Q12348 YDL011CYDL011C 324 nt1.73□□□□□ -2.13
RRI2Q12348 YDR114CYDR114C 303 nt1.73□□□□□ -2.13
RRI2Q12348 COF1YLL050C 432 nt1.73□□□□□ -2.13
RRI2Q12348 YLR140WYLR140W 327 nt1.73□□□□□ -2.13
RRI2Q12348 YNL324WYNL324W 396 nt1.73□□□□□ -2.13
RRI2Q12348 YLR422WYLR422W 5799 nt1.72□□□□□ -2.13
RRI2Q12348 SDH7YDR511W 402 nt1.72□□□□□ -2.13
RRI2Q12348 YIL059CYIL059C 366 nt1.72□□□□□ -2.13
RRI2Q12348 ALK1YGL021W 2283 nt1.71□□□□□ -2.13
RRI2Q12348 EFR3YMR212C 2349 nt1.71□□□□□ -2.14
RRI2Q12348 SRP14YDL092W 441 nt1.71□□□□□ -2.14
RRI2Q12348 RTR1YER139C 681 nt1.71□□□□□ -2.14
Retrieved 100 of 7,029 protein–RNA pairs in 25.6 ms