Protein–RNA interactions for Protein: Q06236

SHH4, Mitochondrial inner membrane protein SHH4, yeastyeast

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHH4Q06236 YOP1YPR028W 543 nt0.69□□□□□ -2.3
SHH4Q06236 ZIP1YDR285W 2628 nt0.68□□□□□ -2.3
SHH4Q06236 MPT5YGL178W 2580 nt0.68□□□□□ -2.3
SHH4Q06236 KAR1YNL188W 1302 nt0.68□□□□□ -2.3
SHH4Q06236 YDR003W-AYDR003W-A 123 nt0.68□□□□□ -2.3
SHH4Q06236 TIM10YHR005C-A 282 nt0.68□□□□□ -2.3
SHH4Q06236 SPC2YML055W 537 nt0.68□□□□□ -2.3
SHH4Q06236 YPL197CYPL197C 414 nt0.68□□□□□ -2.3
SHH4Q06236 UBP3YER151C 2739 nt0.68□□□□□ -2.3
SHH4Q06236 LRP1YHR081W 555 nt0.67□□□□□ -2.3
SHH4Q06236 SEC28YIL076W 891 nt0.67□□□□□ -2.3
SHH4Q06236 YPT6YLR262C 648 nt0.67□□□□□ -2.3
SHH4Q06236 UTP13YLR222C 2454 nt0.67□□□□□ -2.3
SHH4Q06236 BI4Q0120 1917 nt0.67□□□□□ -2.3
SHH4Q06236 NUP157YER105C 4176 nt0.67□□□□□ -2.3
SHH4Q06236 SWI5YDR146C 2130 nt0.67□□□□□ -2.3
SHH4Q06236 SIP4YJL089W 2490 nt0.66□□□□□ -2.3
SHH4Q06236 MRPL32YCR003W 552 nt0.66□□□□□ -2.3
SHH4Q06236 SRP14YDL092W 441 nt0.66□□□□□ -2.3
SHH4Q06236 YAP3YHL009C 993 nt0.66□□□□□ -2.3
SHH4Q06236 YHL037CYHL037C 402 nt0.66□□□□□ -2.3
SHH4Q06236 RPL16AYIL133C 600 nt0.66□□□□□ -2.3
SHH4Q06236 POP7YBR167C 423 nt0.66□□□□□ -2.3
SHH4Q06236 YBR221W-AYBR221W-A 105 nt0.66□□□□□ -2.3
SHH4Q06236 PIG1YLR273C 1947 nt0.66□□□□□ -2.3
SHH4Q06236 YDR169C-AYDR169C-A 150 nt0.65□□□□□ -2.31
SHH4Q06236 YGR115CYGR115C 780 nt0.65□□□□□ -2.31
SHH4Q06236 YKL111CYKL111C 336 nt0.65□□□□□ -2.31
SHH4Q06236 MRPS8YMR158W 468 nt0.65□□□□□ -2.31
SHH4Q06236 YNL146C-AYNL146C-A 195 nt0.65□□□□□ -2.31
SHH4Q06236 CDC24YAL041W 2565 nt0.64□□□□□ -2.31
SHH4Q06236 YGL230CYGL230C 444 nt0.64□□□□□ -2.31
SHH4Q06236 NUT2YPR168W 474 nt0.64□□□□□ -2.31
SHH4Q06236 SET3YKR029C 2256 nt0.64□□□□□ -2.31
SHH4Q06236 YDR220CYDR220C 294 nt0.63□□□□□ -2.31
SHH4Q06236 QCR7YDR529C 384 nt0.63□□□□□ -2.31
SHH4Q06236 YGL109WYGL109W 324 nt0.63□□□□□ -2.31
SHH4Q06236 YML003WYML003W 873 nt0.63□□□□□ -2.31
SHH4Q06236 YBR200W-AYBR200W-A 165 nt0.63□□□□□ -2.31
SHH4Q06236 RIM20YOR275C 1986 nt0.63□□□□□ -2.31
SHH4Q06236 AIM44YPL158C 2277 nt0.62□□□□□ -2.31
SHH4Q06236 YDL073WYDL073W 2955 nt0.62□□□□□ -2.31
SHH4Q06236 RUF22RUF22 515 nt0.62□□□□□ -2.31
SHH4Q06236 YOR199WYOR199W 330 nt0.62□□□□□ -2.31
SHH4Q06236 YPR096CYPR096C 303 nt0.62□□□□□ -2.31
SHH4Q06236 YDL206WYDL206W 2289 nt0.62□□□□□ -2.31
SHH4Q06236 snR5snR5 204 nt0.61□□□□□ -2.31
SHH4Q06236 HNT1YDL125C 477 nt0.61□□□□□ -2.31
SHH4Q06236 YDR509WYDR509W 348 nt0.61□□□□□ -2.31
SHH4Q06236 YEL057CYEL057C 702 nt0.61□□□□□ -2.31
SHH4Q06236 YGL015CYGL015C 393 nt0.61□□□□□ -2.31
SHH4Q06236 RPC10YHR143W-A 213 nt0.61□□□□□ -2.31
SHH4Q06236 NBL1YHR199C-A 222 nt0.61□□□□□ -2.31
SHH4Q06236 SDS22YKL193C 1017 nt0.61□□□□□ -2.31
SHH4Q06236 YHR214C-CYHR214C-C 1437 nt0.61□□□□□ -2.31
SHH4Q06236 MXR1YER042W 555 nt0.6□□□□□ -2.31
SHH4Q06236 YGR228WYGR228W 345 nt0.6□□□□□ -2.31
SHH4Q06236 VAM3YOR106W 852 nt0.6□□□□□ -2.31
SHH4Q06236 YPR099CYPR099C 357 nt0.6□□□□□ -2.31
SHH4Q06236 PAN3YKL025C 2040 nt0.6□□□□□ -2.31
SHH4Q06236 MKT1YNL085W 2493 nt0.6□□□□□ -2.31
SHH4Q06236 MPC1YGL080W 393 nt0.59□□□□□ -2.31
SHH4Q06236 HIT1YJR055W 495 nt0.59□□□□□ -2.31
SHH4Q06236 YLR271WYLR271W 825 nt0.59□□□□□ -2.31
SHH4Q06236 YMR175W-AYMR175W-A 195 nt0.59□□□□□ -2.31
SHH4Q06236 YMR242W-AYMR242W-A 90 nt0.59□□□□□ -2.31
SHH4Q06236 STO1YMR125W 2586 nt0.59□□□□□ -2.32
SHH4Q06236 SCW11YGL028C 1629 nt0.59□□□□□ -2.32
SHH4Q06236 YDL196WYDL196W 330 nt0.58□□□□□ -2.32
SHH4Q06236 YDR008CYDR008C 351 nt0.58□□□□□ -2.32
SHH4Q06236 ERP4YOR016C 624 nt0.58□□□□□ -2.32
SHH4Q06236 AI5_ALPHAQ0070 1893 nt0.58□□□□□ -2.32
SHH4Q06236 SPO23YBR250W 1572 nt0.57□□□□□ -2.32
SHH4Q06236 FIG4YNL325C 2640 nt0.57□□□□□ -2.32
SHH4Q06236 YDR114CYDR114C 303 nt0.57□□□□□ -2.32
SHH4Q06236 YMR272W-AYMR272W-A 114 nt0.57□□□□□ -2.32
SHH4Q06236 YOL038C-AYOL038C-A 96 nt0.57□□□□□ -2.32
SHH4Q06236 YPR159C-AYPR159C-A 102 nt0.57□□□□□ -2.32
SHH4Q06236 YBR121C-AYBR121C-A 159 nt0.57□□□□□ -2.32
SHH4Q06236 PAU24YBR301W 363 nt0.57□□□□□ -2.32
SHH4Q06236 ALY2YJL084C 3141 nt0.57□□□□□ -2.32
SHH4Q06236 PDE2YOR360C 1581 nt0.57□□□□□ -2.32
SHH4Q06236 PRP16YKR086W 3216 nt0.57□□□□□ -2.32
SHH4Q06236 SWF1YDR126W 1011 nt0.56□□□□□ -2.32
SHH4Q06236 YER188C-AYER188C-A 300 nt0.56□□□□□ -2.32
SHH4Q06236 BMT5YIL096C 1011 nt0.56□□□□□ -2.32
SHH4Q06236 YMR031W-AYMR031W-A 327 nt0.56□□□□□ -2.32
SHH4Q06236 YBR032WYBR032W 303 nt0.56□□□□□ -2.32
SHH4Q06236 CSM4YPL200W 471 nt0.56□□□□□ -2.32
SHH4Q06236 YBR071WYBR071W 636 nt0.56□□□□□ -2.32
SHH4Q06236 YCL002CYCL002C 792 nt0.56□□□□□ -2.32
SHH4Q06236 LYS14YDR034C 2373 nt0.56□□□□□ -2.32
SHH4Q06236 TTI1YKL033W 3117 nt0.55□□□□□ -2.32
SHH4Q06236 GPM2YDL021W 936 nt0.55□□□□□ -2.32
SHH4Q06236 HCH1YNL281W 462 nt0.55□□□□□ -2.32
SHH4Q06236 SLM6YBR266C 453 nt0.55□□□□□ -2.32
SHH4Q06236 SLD3YGL113W 2007 nt0.54□□□□□ -2.32
SHH4Q06236 GUP1YGL084C 1683 nt0.54□□□□□ -2.32
SHH4Q06236 snR84snR84 550 nt0.54□□□□□ -2.32
SHH4Q06236 OCA6YDR067C 675 nt0.54□□□□□ -2.32
Retrieved 100 of 7,029 protein–RNA pairs in 87.4 ms