Protein–RNA interactions for Protein: Q04121

NHX1, Endosomal/prevacuolar sodium/hydrogen exchanger, yeastyeast

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NHX1Q04121 NUP100YKL068W 2880 nt2.51□□□□□ -2.01
NHX1Q04121 VMR1YHL035C 4779 nt2.5□□□□□ -2.01
NHX1Q04121 NOP53YPL146C 1368 nt2.5□□□□□ -2.01
NHX1Q04121 ORC2YBR060C 1863 nt2.5□□□□□ -2.01
NHX1Q04121 IRR1YIL026C 3453 nt2.5□□□□□ -2.01
NHX1Q04121 YGR069WYGR069W 336 nt2.5□□□□□ -2.01
NHX1Q04121 YLR146W-AYLR146W-A 189 nt2.5□□□□□ -2.01
NHX1Q04121 YNL114CYNL114C 372 nt2.5□□□□□ -2.01
NHX1Q04121 SPG3YDR504C 384 nt2.49□□□□□ -2.01
NHX1Q04121 PCC1YKR095W-A 267 nt2.49□□□□□ -2.01
NHX1Q04121 UPS1YLR193C 528 nt2.49□□□□□ -2.01
NHX1Q04121 YOR394C-AYOR394C-A 168 nt2.49□□□□□ -2.01
NHX1Q04121 SLM1YIL105C 2061 nt2.48□□□□□ -2.01
NHX1Q04121 NEW1YPL226W 3591 nt2.48□□□□□ -2.01
NHX1Q04121 snR70snR70 164 nt2.48□□□□□ -2.01
NHX1Q04121 RPL42BYHR141C 321 nt2.48□□□□□ -2.01
NHX1Q04121 YAL059C-AYAL059C-A 423 nt2.48□□□□□ -2.01
NHX1Q04121 RPL42AYNL162W 321 nt2.48□□□□□ -2.01
NHX1Q04121 MET18YIL128W 3099 nt2.48□□□□□ -2.01
NHX1Q04121 ZRG8YER033C 3231 nt2.48□□□□□ -2.01
NHX1Q04121 PDR3YBL005W 2931 nt2.48□□□□□ -2.01
NHX1Q04121 PXA2YKL188C 2562 nt2.48□□□□□ -2.01
NHX1Q04121 SLN1YIL147C 3663 nt2.47□□□□□ -2.01
NHX1Q04121 YDL062WYDL062W 426 nt2.47□□□□□ -2.01
NHX1Q04121 YDL211CYDL211C 1119 nt2.47□□□□□ -2.01
NHX1Q04121 YIL032CYIL032C 357 nt2.47□□□□□ -2.01
NHX1Q04121 PAU8YAL068C 363 nt2.47□□□□□ -2.01
NHX1Q04121 PAU20YOL161C 363 nt2.47□□□□□ -2.01
NHX1Q04121 ESC1YMR219W 4977 nt2.47□□□□□ -2.01
NHX1Q04121 KRE33YNL132W 3171 nt2.47□□□□□ -2.01
NHX1Q04121 YGR265WYGR265W 411 nt2.46□□□□□ -2.02
NHX1Q04121 YHL042WYHL042W 453 nt2.46□□□□□ -2.02
NHX1Q04121 YIL156W-BYIL156W-B 222 nt2.46□□□□□ -2.02
NHX1Q04121 YPR063CYPR063C 423 nt2.46□□□□□ -2.02
NHX1Q04121 PSD2YGR170W 3417 nt2.46□□□□□ -2.02
NHX1Q04121 TUS1YLR425W 3924 nt2.46□□□□□ -2.02
NHX1Q04121 BUB1YGR188C 3066 nt2.45□□□□□ -2.02
NHX1Q04121 RPH1YER169W 2391 nt2.45□□□□□ -2.02
NHX1Q04121 RAD61YDR014W 1944 nt2.45□□□□□ -2.02
NHX1Q04121 YCR043CYCR043C 384 nt2.45□□□□□ -2.02
NHX1Q04121 YGL188C-AYGL188C-A 141 nt2.45□□□□□ -2.02
NHX1Q04121 YLR154W-AYLR154W-A 186 nt2.45□□□□□ -2.02
NHX1Q04121 YLR255CYLR255C 354 nt2.45□□□□□ -2.02
NHX1Q04121 snR43snR43 209 nt2.45□□□□□ -2.02
NHX1Q04121 PHO91YNR013C 2685 nt2.44□□□□□ -2.02
NHX1Q04121 MNE1YOR350C 1992 nt2.44□□□□□ -2.02
NHX1Q04121 YDR426CYDR426C 378 nt2.44□□□□□ -2.02
NHX1Q04121 YEL020C-BYEL020C-B 198 nt2.44□□□□□ -2.02
NHX1Q04121 YKL183C-AYKL183C-A 213 nt2.44□□□□□ -2.02
NHX1Q04121 YMR141W-AYMR141W-A 225 nt2.44□□□□□ -2.02
NHX1Q04121 YOR008C-AYOR008C-A 225 nt2.44□□□□□ -2.02
NHX1Q04121 SWI6YLR182W 2412 nt2.44□□□□□ -2.02
NHX1Q04121 UBR1YGR184C 5853 nt2.44□□□□□ -2.02
NHX1Q04121 COG8YML071C 1824 nt2.44□□□□□ -2.02
NHX1Q04121 PHO2YDL106C 1680 nt2.44□□□□□ -2.02
NHX1Q04121 VTC3YPL019C 2508 nt2.43□□□□□ -2.02
NHX1Q04121 YPR002C-AYPR002C-A 198 nt2.43□□□□□ -2.02
NHX1Q04121 STE11YLR362W 2154 nt2.43□□□□□ -2.02
NHX1Q04121 EDS1YBR033W 2760 nt2.43□□□□□ -2.02
NHX1Q04121 PDR11YIL013C 4236 nt2.42□□□□□ -2.02
NHX1Q04121 CFT2YLR115W 2580 nt2.42□□□□□ -2.02
NHX1Q04121 VPS8YAL002W 3825 nt2.42□□□□□ -2.02
NHX1Q04121 TRX1YLR043C 312 nt2.42□□□□□ -2.02
NHX1Q04121 RPS17AYML024W 411 nt2.42□□□□□ -2.02
NHX1Q04121 CSF1YLR087C 8877 nt2.42□□□□□ -2.02
NHX1Q04121 COS111YBR203W 2775 nt2.42□□□□□ -2.02
NHX1Q04121 MSB1YOR188W 3414 nt2.41□□□□□ -2.02
NHX1Q04121 MUK1YPL070W 1839 nt2.41□□□□□ -2.02
NHX1Q04121 MVP1YMR004W 1536 nt2.41□□□□□ -2.02
NHX1Q04121 SMC6YLR383W 3345 nt2.4□□□□□ -2.02
NHX1Q04121 SWI5YDR146C 2130 nt2.4□□□□□ -2.03
NHX1Q04121 JLP2YMR132C 627 nt2.4□□□□□ -2.03
NHX1Q04121 KTI11YBL071W-A 249 nt2.4□□□□□ -2.03
NHX1Q04121 snR49snR49 165 nt2.4□□□□□ -2.03
NHX1Q04121 YGR250CYGR250C 2346 nt2.4□□□□□ -2.03
NHX1Q04121 YFH1YDL120W 525 nt2.39□□□□□ -2.03
NHX1Q04121 snR80snR80 171 nt2.39□□□□□ -2.03
NHX1Q04121 ARP7YPR034W 1434 nt2.39□□□□□ -2.03
NHX1Q04121 SSQ1YLR369W 1974 nt2.39□□□□□ -2.03
NHX1Q04121 CLN3YAL040C 1743 nt2.39□□□□□ -2.03
NHX1Q04121 SVL3YPL032C 2478 nt2.39□□□□□ -2.03
NHX1Q04121 SGS1YMR190C 4344 nt2.38□□□□□ -2.03
NHX1Q04121 INP2YMR163C 2118 nt2.38□□□□□ -2.03
NHX1Q04121 RFX1YLR176C 2436 nt2.38□□□□□ -2.03
NHX1Q04121 MCD1YDL003W 1701 nt2.38□□□□□ -2.03
NHX1Q04121 tM(CAU)Q1tM(CAU)Q1 76 nt2.38□□□□□ -2.03
NHX1Q04121 snR60snR60 104 nt2.37□□□□□ -2.03
NHX1Q04121 PAU18YLL064C 363 nt2.37□□□□□ -2.03
NHX1Q04121 PAU6YNR076W 363 nt2.37□□□□□ -2.03
NHX1Q04121 SCW11YGL028C 1629 nt2.37□□□□□ -2.03
NHX1Q04121 SCD5YOR329C 2619 nt2.37□□□□□ -2.03
NHX1Q04121 YPP1YGR198W 2454 nt2.36□□□□□ -2.03
NHX1Q04121 VPS13YLL040C 9435 nt2.36□□□□□ -2.03
NHX1Q04121 SLY1YDR189W 2001 nt2.36□□□□□ -2.03
NHX1Q04121 MRP10YDL045W-A 288 nt2.36□□□□□ -2.03
NHX1Q04121 YRB1YDR002W 606 nt2.36□□□□□ -2.03
NHX1Q04121 SDH2YLL041C 801 nt2.36□□□□□ -2.03
NHX1Q04121 TRA1YHR099W 11235 nt2.36□□□□□ -2.03
NHX1Q04121 LYS14YDR034C 2373 nt2.36□□□□□ -2.03
NHX1Q04121 PLC1YPL268W 2610 nt2.36□□□□□ -2.03
Retrieved 100 of 7,029 protein–RNA pairs in 236 ms