Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
HMGCS1Q01581 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HMGCS1Q01581 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
HMGCS1Q01581 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HMGCS1Q01581 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.47■□□□□ 0.71
HMGCS1Q01581 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.47■□□□□ 0.71
HMGCS1Q01581 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMGCS1Q01581 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HMGCS1Q01581 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMGCS1Q01581 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMGCS1Q01581 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.46■□□□□ 0.71
HMGCS1Q01581 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HMGCS1Q01581 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.46■□□□□ 0.71
HMGCS1Q01581 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.46■□□□□ 0.71
HMGCS1Q01581 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMGCS1Q01581 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.46■□□□□ 0.71
HMGCS1Q01581 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMGCS1Q01581 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HMGCS1Q01581 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMGCS1Q01581 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
HMGCS1Q01581 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.46■□□□□ 0.71
HMGCS1Q01581 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
HMGCS1Q01581 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMGCS1Q01581 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.46■□□□□ 0.71
HMGCS1Q01581 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.46■□□□□ 0.71
HMGCS1Q01581 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.46■□□□□ 0.71
HMGCS1Q01581 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.46■□□□□ 0.71
HMGCS1Q01581 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.46■□□□□ 0.71
HMGCS1Q01581 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMGCS1Q01581 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.45■□□□□ 0.7
HMGCS1Q01581 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
HMGCS1Q01581 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
HMGCS1Q01581 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGCS1Q01581 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGCS1Q01581 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.45■□□□□ 0.7
HMGCS1Q01581 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGCS1Q01581 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.45■□□□□ 0.7
HMGCS1Q01581 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGCS1Q01581 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
HMGCS1Q01581 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGCS1Q01581 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGCS1Q01581 AC137761.2-201ENST00000561729 223 ntBASIC19.45■□□□□ 0.7
HMGCS1Q01581 AC145350.3-201ENST00000569033 163 ntBASIC19.45■□□□□ 0.7
HMGCS1Q01581 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
HMGCS1Q01581 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
HMGCS1Q01581 AL591742.1-201ENST00000604433 565 ntBASIC19.45■□□□□ 0.7
HMGCS1Q01581 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.45■□□□□ 0.7
HMGCS1Q01581 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HMGCS1Q01581 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
HMGCS1Q01581 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HMGCS1Q01581 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGCS1Q01581 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HMGCS1Q01581 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGCS1Q01581 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.45■□□□□ 0.7
HMGCS1Q01581 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HMGCS1Q01581 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
HMGCS1Q01581 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGCS1Q01581 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGCS1Q01581 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HMGCS1Q01581 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.44■□□□□ 0.7
HMGCS1Q01581 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGCS1Q01581 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGCS1Q01581 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGCS1Q01581 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HMGCS1Q01581 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HMGCS1Q01581 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGCS1Q01581 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.44■□□□□ 0.7
HMGCS1Q01581 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGCS1Q01581 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.44■□□□□ 0.7
HMGCS1Q01581 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.44■□□□□ 0.7
HMGCS1Q01581 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGCS1Q01581 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.44■□□□□ 0.7
HMGCS1Q01581 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HMGCS1Q01581 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HMGCS1Q01581 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.43■□□□□ 0.7
HMGCS1Q01581 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
HMGCS1Q01581 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.43■□□□□ 0.7
HMGCS1Q01581 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGCS1Q01581 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.43■□□□□ 0.7
HMGCS1Q01581 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGCS1Q01581 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGCS1Q01581 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
HMGCS1Q01581 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGCS1Q01581 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGCS1Q01581 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.43■□□□□ 0.7
HMGCS1Q01581 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.43■□□□□ 0.7
HMGCS1Q01581 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.43■□□□□ 0.7
HMGCS1Q01581 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
HMGCS1Q01581 AC016405.3-201ENST00000607710 860 ntBASIC19.43■□□□□ 0.7
HMGCS1Q01581 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HMGCS1Q01581 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.43■□□□□ 0.7
HMGCS1Q01581 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGCS1Q01581 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.43■□□□□ 0.7
HMGCS1Q01581 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGCS1Q01581 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGCS1Q01581 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HMGCS1Q01581 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HMGCS1Q01581 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.42■□□□□ 0.7
HMGCS1Q01581 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HMGCS1Q01581 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms