Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.28■■□□□ 1
USP46P62068 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
USP46P62068 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.28■■□□□ 1
USP46P62068 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
USP46P62068 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
USP46P62068 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.27■■□□□ 1
USP46P62068 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.27■■□□□ 1
USP46P62068 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
USP46P62068 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
USP46P62068 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.27■■□□□ 1
USP46P62068 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
USP46P62068 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.27■■□□□ 1
USP46P62068 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
USP46P62068 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
USP46P62068 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
USP46P62068 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.27■□□□□ 0.99
USP46P62068 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
USP46P62068 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
USP46P62068 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP46P62068 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP46P62068 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP46P62068 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
USP46P62068 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP46P62068 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP46P62068 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP46P62068 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.26■□□□□ 0.99
USP46P62068 GCSHP5-201ENST00000443090 522 ntBASIC21.26■□□□□ 0.99
USP46P62068 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP46P62068 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.26■□□□□ 0.99
USP46P62068 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.26■□□□□ 0.99
USP46P62068 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.26■□□□□ 0.99
USP46P62068 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.26■□□□□ 0.99
USP46P62068 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
USP46P62068 AC006557.6-201ENST00000623071 864 ntBASIC21.26■□□□□ 0.99
USP46P62068 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP46P62068 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP46P62068 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.26■□□□□ 0.99
USP46P62068 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
USP46P62068 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
USP46P62068 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
USP46P62068 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP46P62068 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
USP46P62068 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP46P62068 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP46P62068 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
USP46P62068 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP46P62068 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
USP46P62068 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
USP46P62068 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
USP46P62068 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.25■□□□□ 0.99
USP46P62068 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.25■□□□□ 0.99
USP46P62068 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.25■□□□□ 0.99
USP46P62068 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP46P62068 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.25■□□□□ 0.99
USP46P62068 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.25■□□□□ 0.99
USP46P62068 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP46P62068 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.25■□□□□ 0.99
USP46P62068 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP46P62068 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.25■□□□□ 0.99
USP46P62068 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP46P62068 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.25■□□□□ 0.99
USP46P62068 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.25■□□□□ 0.99
USP46P62068 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.25■□□□□ 0.99
USP46P62068 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
USP46P62068 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.25■□□□□ 0.99
USP46P62068 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP46P62068 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.25■□□□□ 0.99
USP46P62068 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP46P62068 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.24■□□□□ 0.99
USP46P62068 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
USP46P62068 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
USP46P62068 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP46P62068 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.24■□□□□ 0.99
USP46P62068 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP46P62068 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
USP46P62068 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP46P62068 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.24■□□□□ 0.99
USP46P62068 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP46P62068 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP46P62068 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
USP46P62068 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.24■□□□□ 0.99
USP46P62068 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
USP46P62068 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.24■□□□□ 0.99
USP46P62068 AC005829.2-201ENST00000571422 1056 ntBASIC21.24■□□□□ 0.99
USP46P62068 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP46P62068 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP46P62068 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
USP46P62068 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.24■□□□□ 0.99
USP46P62068 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP46P62068 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.24■□□□□ 0.99
USP46P62068 AC092667.1-201ENST00000434301 2586 ntBASIC21.24■□□□□ 0.99
USP46P62068 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.24■□□□□ 0.99
USP46P62068 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
USP46P62068 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.23■□□□□ 0.99
USP46P62068 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP46P62068 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.23■□□□□ 0.99
USP46P62068 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP46P62068 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP46P62068 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
USP46P62068 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms