Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PDX1P52945 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDX1P52945 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDX1P52945 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDX1P52945 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDX1P52945 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDX1P52945 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDX1P52945 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDX1P52945 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDX1P52945 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
PDX1P52945 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDX1P52945 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDX1P52945 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
PDX1P52945 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDX1P52945 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PDX1P52945 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDX1P52945 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.63■□□□□ 0.73
PDX1P52945 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDX1P52945 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.63■□□□□ 0.73
PDX1P52945 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PDX1P52945 MTDHP1-201ENST00000605323 784 ntBASIC19.63■□□□□ 0.73
PDX1P52945 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
PDX1P52945 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDX1P52945 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDX1P52945 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDX1P52945 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.62■□□□□ 0.73
PDX1P52945 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDX1P52945 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PDX1P52945 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.62■□□□□ 0.73
PDX1P52945 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.62■□□□□ 0.73
PDX1P52945 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDX1P52945 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDX1P52945 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.62■□□□□ 0.73
PDX1P52945 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
PDX1P52945 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.62■□□□□ 0.73
PDX1P52945 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.62■□□□□ 0.73
PDX1P52945 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PDX1P52945 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDX1P52945 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.62■□□□□ 0.73
PDX1P52945 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.62■□□□□ 0.73
PDX1P52945 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.62■□□□□ 0.73
PDX1P52945 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PDX1P52945 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDX1P52945 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDX1P52945 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
PDX1P52945 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PDX1P52945 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.62■□□□□ 0.73
PDX1P52945 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.62■□□□□ 0.73
PDX1P52945 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDX1P52945 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDX1P52945 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDX1P52945 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDX1P52945 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDX1P52945 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.61■□□□□ 0.73
PDX1P52945 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PDX1P52945 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDX1P52945 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PDX1P52945 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDX1P52945 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PDX1P52945 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PDX1P52945 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
PDX1P52945 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDX1P52945 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.61■□□□□ 0.73
PDX1P52945 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDX1P52945 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PDX1P52945 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PDX1P52945 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.61■□□□□ 0.73
PDX1P52945 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PDX1P52945 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
PDX1P52945 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.61■□□□□ 0.73
PDX1P52945 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDX1P52945 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDX1P52945 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDX1P52945 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PDX1P52945 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PDX1P52945 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDX1P52945 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDX1P52945 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDX1P52945 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDX1P52945 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDX1P52945 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDX1P52945 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PDX1P52945 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
PDX1P52945 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PDX1P52945 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
PDX1P52945 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PDX1P52945 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.6■□□□□ 0.73
PDX1P52945 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDX1P52945 ECEL1P3-201ENST00000427961 737 ntBASIC19.6■□□□□ 0.73
PDX1P52945 AC012618.2-201ENST00000428058 849 ntBASIC19.6■□□□□ 0.73
PDX1P52945 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
PDX1P52945 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.6■□□□□ 0.73
PDX1P52945 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.6■□□□□ 0.73
PDX1P52945 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDX1P52945 AC233702.5-201ENST00000584107 538 ntBASIC19.6■□□□□ 0.73
PDX1P52945 AC124016.1-201ENST00000609552 612 ntBASIC19.6■□□□□ 0.73
PDX1P52945 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PDX1P52945 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDX1P52945 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PDX1P52945 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms