Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.48■□□□□ 0.55
SLC9A3P48764 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC9A3P48764 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.48■□□□□ 0.55
SLC9A3P48764 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC9A3P48764 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.47■□□□□ 0.55
SLC9A3P48764 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC9A3P48764 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC9A3P48764 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SLC9A3P48764 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC9A3P48764 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC9A3P48764 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC9A3P48764 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC9A3P48764 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SLC9A3P48764 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC9A3P48764 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC9A3P48764 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC9A3P48764 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC9A3P48764 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.47■□□□□ 0.55
SLC9A3P48764 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC9A3P48764 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC9A3P48764 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC9A3P48764 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC9A3P48764 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC9A3P48764 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC9A3P48764 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.47■□□□□ 0.55
SLC9A3P48764 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC9A3P48764 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC9A3P48764 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SLC9A3P48764 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
SLC9A3P48764 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SLC9A3P48764 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC9A3P48764 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC9A3P48764 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SLC9A3P48764 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC9A3P48764 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.46■□□□□ 0.55
SLC9A3P48764 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC9A3P48764 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC9A3P48764 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC9A3P48764 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC9A3P48764 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SLC9A3P48764 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC9A3P48764 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.46■□□□□ 0.55
SLC9A3P48764 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.46■□□□□ 0.55
SLC9A3P48764 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC9A3P48764 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC9A3P48764 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
SLC9A3P48764 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SLC9A3P48764 RBM17P2-201ENST00000616397 1405 ntBASIC18.46■□□□□ 0.55
SLC9A3P48764 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC9A3P48764 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC9A3P48764 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC9A3P48764 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC9A3P48764 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.46■□□□□ 0.55
SLC9A3P48764 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC9A3P48764 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
SLC9A3P48764 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SLC9A3P48764 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC9A3P48764 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC9A3P48764 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SLC9A3P48764 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC9A3P48764 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC9A3P48764 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.45■□□□□ 0.54
SLC9A3P48764 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
SLC9A3P48764 KRT19P1-201ENST00000405746 1186 ntBASIC18.45■□□□□ 0.54
SLC9A3P48764 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
SLC9A3P48764 AC091799.1-201ENST00000422823 811 ntBASIC18.45■□□□□ 0.54
SLC9A3P48764 AC007322.3-201ENST00000426526 701 ntBASIC18.45■□□□□ 0.54
SLC9A3P48764 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.45■□□□□ 0.54
SLC9A3P48764 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.45■□□□□ 0.54
SLC9A3P48764 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.45■□□□□ 0.54
SLC9A3P48764 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.45■□□□□ 0.54
SLC9A3P48764 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
SLC9A3P48764 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
SLC9A3P48764 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.45■□□□□ 0.54
SLC9A3P48764 AC004854.2-201ENST00000608450 1441 ntBASIC18.45■□□□□ 0.54
SLC9A3P48764 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC9A3P48764 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.45■□□□□ 0.54
SLC9A3P48764 SMG8-203ENST00000578922 2178 ntBASIC18.45■□□□□ 0.54
SLC9A3P48764 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC9A3P48764 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SLC9A3P48764 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.45■□□□□ 0.54
SLC9A3P48764 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.45■□□□□ 0.54
SLC9A3P48764 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SLC9A3P48764 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC9A3P48764 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.44■□□□□ 0.54
SLC9A3P48764 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.44■□□□□ 0.54
SLC9A3P48764 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC9A3P48764 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC9A3P48764 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.44■□□□□ 0.54
SLC9A3P48764 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SLC9A3P48764 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC9A3P48764 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.44■□□□□ 0.54
SLC9A3P48764 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.44■□□□□ 0.54
SLC9A3P48764 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.44■□□□□ 0.54
SLC9A3P48764 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.44■□□□□ 0.54
SLC9A3P48764 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC9A3P48764 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
SLC9A3P48764 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.44■□□□□ 0.54
SLC9A3P48764 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC9A3P48764 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms