Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC30.54■■■□□ 2.48
KDM5CP41229 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
KDM5CP41229 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
KDM5CP41229 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC30.54■■■□□ 2.48
KDM5CP41229 NAPSB-206ENST00000562112 1266 ntBASIC30.54■■■□□ 2.48
KDM5CP41229 AC006011.2-201ENST00000621313 1158 ntBASIC30.54■■■□□ 2.48
KDM5CP41229 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
KDM5CP41229 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC30.53■■■□□ 2.48
KDM5CP41229 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
KDM5CP41229 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC30.53■■■□□ 2.48
KDM5CP41229 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC30.53■■■□□ 2.48
KDM5CP41229 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
KDM5CP41229 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC30.53■■■□□ 2.48
KDM5CP41229 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
KDM5CP41229 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC30.53■■■□□ 2.48
KDM5CP41229 CFL2-205ENST00000555765 632 ntTSL 2 BASIC30.53■■■□□ 2.48
KDM5CP41229 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC30.53■■■□□ 2.48
KDM5CP41229 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC30.53■■■□□ 2.48
KDM5CP41229 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
KDM5CP41229 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC30.52■■■□□ 2.48
KDM5CP41229 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC30.52■■■□□ 2.48
KDM5CP41229 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC30.52■■■□□ 2.48
KDM5CP41229 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC30.52■■■□□ 2.48
KDM5CP41229 AC233723.2-201ENST00000623798 2106 ntBASIC30.52■■■□□ 2.48
KDM5CP41229 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
KDM5CP41229 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
KDM5CP41229 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
KDM5CP41229 TERT-206ENST00000508104 2486 ntTSL 5 BASIC30.51■■■□□ 2.48
KDM5CP41229 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC30.51■■■□□ 2.48
KDM5CP41229 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
KDM5CP41229 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
KDM5CP41229 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC30.51■■■□□ 2.47
KDM5CP41229 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
KDM5CP41229 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC30.51■■■□□ 2.47
KDM5CP41229 AC133561.1-201ENST00000568600 2415 ntBASIC30.51■■■□□ 2.47
KDM5CP41229 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC30.51■■■□□ 2.47
KDM5CP41229 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
KDM5CP41229 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC30.51■■■□□ 2.47
KDM5CP41229 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
KDM5CP41229 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
KDM5CP41229 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
KDM5CP41229 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
KDM5CP41229 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC30.5■■■□□ 2.47
KDM5CP41229 GUSBP5-202ENST00000510805 1989 ntBASIC30.5■■■□□ 2.47
KDM5CP41229 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
KDM5CP41229 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
KDM5CP41229 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC30.5■■■□□ 2.47
KDM5CP41229 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
KDM5CP41229 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC30.5■■■□□ 2.47
KDM5CP41229 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC30.5■■■□□ 2.47
KDM5CP41229 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC30.5■■■□□ 2.47
KDM5CP41229 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC30.5■■■□□ 2.47
KDM5CP41229 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC30.5■■■□□ 2.47
KDM5CP41229 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
KDM5CP41229 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC30.5■■■□□ 2.47
KDM5CP41229 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
KDM5CP41229 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
KDM5CP41229 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC30.49■■■□□ 2.47
KDM5CP41229 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC30.49■■■□□ 2.47
KDM5CP41229 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC30.49■■■□□ 2.47
KDM5CP41229 NTF6B-201ENST00000591913 560 ntBASIC30.49■■■□□ 2.47
KDM5CP41229 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC30.49■■■□□ 2.47
KDM5CP41229 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
KDM5CP41229 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
KDM5CP41229 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC30.49■■■□□ 2.47
KDM5CP41229 KRT18P22-201ENST00000402024 1347 ntBASIC30.49■■■□□ 2.47
KDM5CP41229 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC30.49■■■□□ 2.47
KDM5CP41229 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
KDM5CP41229 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
KDM5CP41229 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
KDM5CP41229 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
KDM5CP41229 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC30.49■■■□□ 2.47
KDM5CP41229 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
KDM5CP41229 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC30.48■■■□□ 2.47
KDM5CP41229 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC30.48■■■□□ 2.47
KDM5CP41229 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC30.48■■■□□ 2.47
KDM5CP41229 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC30.48■■■□□ 2.47
KDM5CP41229 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC30.48■■■□□ 2.47
KDM5CP41229 KRT16P1-201ENST00000399124 1418 ntBASIC30.48■■■□□ 2.47
KDM5CP41229 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC30.48■■■□□ 2.47
KDM5CP41229 AP002982.1-201ENST00000492365 877 ntBASIC30.48■■■□□ 2.47
KDM5CP41229 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC30.48■■■□□ 2.47
KDM5CP41229 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
KDM5CP41229 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
KDM5CP41229 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
KDM5CP41229 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
KDM5CP41229 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC30.47■■■□□ 2.47
KDM5CP41229 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC30.47■■■□□ 2.47
KDM5CP41229 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC30.47■■■□□ 2.47
KDM5CP41229 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
KDM5CP41229 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
KDM5CP41229 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
KDM5CP41229 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
KDM5CP41229 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC30.46■■■□□ 2.47
KDM5CP41229 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC30.46■■■□□ 2.47
KDM5CP41229 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
KDM5CP41229 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
KDM5CP41229 MFF-203ENST00000349901 1716 ntTSL 2 BASIC30.46■■■□□ 2.47
KDM5CP41229 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
KDM5CP41229 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC30.46■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms